PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Thhalv10025733m
Common NameEUTSA_v10025733mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
Family bZIP
Protein Properties Length: 323aa    MW: 35118.8 Da    PI: 5.929
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Thhalv10025733mgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_177.41.8e-24227289163
                      XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                      e+elkr++rkq+NRe+ArrsR+RK+ae+e+L+++v++L++eN++L++el++l+ e++klk+e+
  Thhalv10025733m 227 ERELKRQKRKQSNRESARRSRLRKQAECEQLQQRVESLTNENQSLRDELQRLSGECEKLKTEN 289
                      89**********************************************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077776.0E-2733103IPR012900G-box binding protein, multifunctional mosaic region
Gene3DG3DSA:1.20.5.1702.2E-20224287No hitNo description
PfamPF001701.8E-22227289IPR004827Basic-leucine zipper domain
SMARTSM003386.2E-23227291IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.587229292IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.81E-12230286No hitNo description
CDDcd147021.11E-23232282No hitNo description
PROSITE patternPS000360234249IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010310Biological Processregulation of hydrogen peroxide metabolic process
GO:0010629Biological Processnegative regulation of gene expression
GO:0090342Biological Processregulation of cell aging
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    Send to blast
MDTETIQFEL HFFSSSAYVW FMLSTSCLQD IPPTPYPDWS NSMQAYYGGG GTPNPFFPSP  60
VGSPSPHPYM WGAQHHMMPP YGTPVPYPAM YPPGAVYAHP SMPMPPTCGP TNKETVKEQA  120
SGKKSKGNLK RKGEGGEKAP SGSGNDGVSQ SDESVTAGSS DENGENANHQ EQGSVRKPSF  180
GQMLADASSQ SNTTGEIVPM KPVAPGTNLN IGMDLWSSQA GVAVKDEREL KRQKRKQSNR  240
ESARRSRLRK QAECEQLQQR VESLTNENQS LRDELQRLSG ECEKLKTENN TIQDELLRVH  300
GPEAVANLEQ NSAASKDGEG TN*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1243249RRSRLRK
2243250RRSRLRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00039PBMTransfer from AT4G36730Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAJ8432570.0AJ843257.1 Arabidopsis thaliana mRNA for Z-box binding factor 2 protein (ZBF2 gene).
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006411968.10.0hypothetical protein EUTSA_v10025733mg
SwissprotP427740.0GBF1_ARATH; G-box-binding factor 1
TrEMBLV4P2370.0V4P237_EUTSA; Uncharacterized protein
STRINGBra011701.1-P0.0(Brassica rapa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM72742643
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36730.11e-172G-box binding factor 1