PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Thhalv10025260m
Common NameEUTSA_v10025260mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
Family C2H2
Protein Properties Length: 432aa    MW: 47560.1 Da    PI: 9.8349
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Thhalv10025260mgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE patternPS000280198219IPR007087Zinc finger, C2H2
SuperFamilySSF563991.44E-24221430No hitNo description
Gene3DG3DSA:3.90.228.102.9E-11224427IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 432 aa     Download sequence    Send to blast
MEASRTRSEK KKLERENSNS QKNKKLPSVW FSLKKSLYCK SDPSDVHDPR SRKELATIST  60
KSTTYRSGCS RSIANLKDVI HGSNRHLEKP PCSSPRSIGS SEFLNPITHE VILSNSTSEL  120
KITGAGDISS PTGAREFLGT LRPGTPLNYS CSYRSHTSRK ASLAVLERDR EGLVIHPSRR  180
ASLERDSAIN GGSSSVSCHK CGEKFSKLEA AEAHHLTKHA VTELVDGDSS RKIVEIICRT  240
SWSKSENQGE RIDRILKVHN MHKTLARFEE YRDTVKSRAS KLQKKHPRCI ADGNELLRFH  300
GTTVACVLGV NGSTSLCSSE KCCVCRIIRN GFSAKREMNN GIGVFTASTS GRAFESIAIA  360
GDEGKTERKA LIVCRVIAGR VHRPVENVEE TGWLNGFDSL AGKVGLYTNV EELYLLNSRA  420
LLPCFVVICK P*
Cis-element ? help Back to Top
SourceLink
PlantRegMapThhalv10025260m
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006413099.10.0uncharacterized protein LOC18030024 isoform X2
TrEMBLV4MH050.0V4MH05_EUTSA; Uncharacterized protein
STRINGXP_006413099.10.0(Eutrema salsugineum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM3553812
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27240.10.0C2H2 family protein