PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Thhalv10025203m
Common NameEUTSA_v10025203mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
Family bZIP
Protein Properties Length: 446aa    MW: 48981 Da    PI: 8.8853
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Thhalv10025203mgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1439.6e-14367419556
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke.leelkkev 56 
                      +r++r++kNRe+A rsR+RK+a++ eLe +v++L++ N++L+ + +e ++k+ 
  Thhalv10025203m 367 RRQKRMIKNRESAARSRARKQAYTLELEAEVAQLKEMNEELQRKqVEIMEKQK 419
                      69*************************************99654044444444 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.8E-12363428IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.553365410IPR004827Basic-leucine zipper domain
PfamPF001708.6E-12367424IPR004827Basic-leucine zipper domain
CDDcd147071.03E-26367421No hitNo description
Gene3DG3DSA:1.20.5.1701.2E-13367422No hitNo description
SuperFamilySSF579596.25E-10367412No hitNo description
PROSITE patternPS000360370385IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0009651Biological Processresponse to salt stress
GO:0009738Biological Processabscisic acid-activated signaling pathway
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0000976Molecular Functiontranscription regulatory region sequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 446 aa     Download sequence    Send to blast
MGSRINFNNF VDGVSDEVTN TKQPTMGTSL PLTRQNSVFS LTFDEFQNSW GGGIGKDFGS  60
MNMDELLKNI WTAEESHSMM GNNTSFNNGN SGNAVMNCGN NDGGLSVGVG GEVSGGFYTG  120
GSLQRQGSLT LPRTISQKRV DDVWKELMKE DDTGNGVANG GTSGIPQRQQ TLGEMTLEEF  180
LVRAGVVREE SQPVDNFNGG FYGFGTNAGL GSARNGFGPN QPHDFSGNGA VVRPDLLTTQ  240
TRPLQMQQPQ KVHQPQELIQ KSEIPFAKQN TITFSNTVDA DNRSQPATQC QEVKPSILGI  300
QDHPMNRNLL QAVDFKTGVT VAAVSPGSQM SPDLTPKSAM DASLSPVPYM FGRVRKTGAV  360
LEKVIERRQK RMIKNRESAA RSRARKQAYT LELEAEVAQL KEMNEELQRK QVEIMEKQKK  420
QLLEPKRQPW GCKRQCLRRT LTGPW*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00038PBMTransfer from AT4G34000Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3534080.0AK353408.1 Thellungiella halophila mRNA, complete cds, clone: RTFL01-30-J01.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006412286.10.0hypothetical protein EUTSA_v10025203mg
SwissprotQ9M7Q30.0AI5L6_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 6
TrEMBLE4MY110.0E4MY11_EUTHA; mRNA, clone: RTFL01-30-J01
TrEMBLV4MBG20.0V4MBG2_EUTSA; Uncharacterized protein
STRINGAT4G34000.10.0(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM73427129
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34000.20.0abscisic acid responsive elements-binding factor 3