PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Thhalv10021704m
Common NameEUTSA_v10021704mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
Family bZIP
Protein Properties Length: 150aa    MW: 16825.6 Da    PI: 9.5761
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Thhalv10021704mgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_141.43.2e-1377136261
                      XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 
                      ke +  +r+ +NR++A+  R+RKk ++  Le ++ eL++ N++L +++++l +e   l++
  Thhalv10021704m  77 KEYRSLKRLLRNRVSAQQARERKKVYVSDLESRANELQNNNDQLEEKISTLMNENTMLRK 136
                      778889***********************************************9987765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.5E-1276140IPR004827Basic-leucine zipper domain
PfamPF001701.3E-1277136IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.35878138IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.44E-1380138No hitNo description
Gene3DG3DSA:1.20.5.1707.5E-1782139No hitNo description
CDDcd147041.85E-1482131No hitNo description
PROSITE patternPS0003608398IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010224Biological Processresponse to UV-B
GO:0080167Biological Processresponse to karrikin
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    Send to blast
MSLQRPNGNS SSSSSPKKHK TEESDEELLM VPDMEAAGST GVQSSSAEDG INNPEIDQTQ  60
NGISAAKRRR GRNPVDKEYR SLKRLLRNRV SAQQARERKK VYVSDLESRA NELQNNNDQL  120
EEKISTLMNE NTMLRKMLIN SRPKADDNH*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK1755231e-154AK175523.1 Arabidopsis thaliana mRNA for bZip transcription factor AtbZip64, complete cds, clone: RAFL21-94-F18.
GenBankAK1754401e-154AK175440.1 Arabidopsis thaliana mRNA for bZip transcription factor AtbZip64, complete cds, clone: RAFL21-87-C16.
GenBankAF4534771e-154AF453477.1 Arabidopsis thaliana HY5-like protein (HYH) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006406712.11e-104hypothetical protein EUTSA_v10021704mg
SwissprotQ8W1918e-91HYH_ARATH; Transcription factor HY5-like
TrEMBLV4LCK31e-104V4LCK3_EUTSA; Uncharacterized protein
STRINGAT3G17609.22e-88(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM102661829
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G17609.22e-80HY5-homolog