PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Thhalv10018547m
Common NameEUTSA_v10018547mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
Family bZIP
Protein Properties Length: 447aa    MW: 50094.2 Da    PI: 6.1979
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Thhalv10018547mgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.73.3e-10162200742
                      HHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHHH CS
           bZIP_1   7 errkqkNReAArrsRqRKkaeieeLee...kvkeLeaeN 42 
                       rr+++NReAAr+sR+RKka++++Le+   + ++Le+e 
  Thhalv10018547m 162 LRRLAQNREAARKSRLRKKAYVQQLENsriRLAQLEEEL 200
                      69************************8333455555543 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.4E-5156227IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.002158202IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.09E-6161203No hitNo description
PfamPF001709.5E-7162199IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.5E-8163205No hitNo description
PROSITE patternPS000360163178IPR004827Basic-leucine zipper domain
PfamPF141445.1E-28245318IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009909Biological Processregulation of flower development
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 447 aa     Download sequence    Send to blast
MQSSFKTVPF NPDFYSQASF FFRGDSCLEE FHQPNNGFVH HDEAIDLSPN VTIASANLHY  60
TTFDTVMDCG LRERLEGEDG CLDTGQLVYQ RGTRGVGGEV NSSLEKWGDS VSAMADNSQH  120
TDTSTDIDTD DKTQLNGVHQ GMLLATNCSD KSKVRSSEQS TLRRLAQNRE AARKSRLRKK  180
AYVQQLENSR IRLAQLEEEL KRARQQGCSV ESGVSRDQTQ LSAGNGAFSF ELEYARWMEE  240
HQRLINDLRA GVNSQLGDNE LRVLVDAVMS HYDEIFRLKG IGTKVDVFHM LSGMWKTPAE  300
RFFMWLGGFR SSELLKILGN HVDPLTDQQL IGICNLQQSS QQAEDALSQG MEALQQSLLE  360
TLSSASMGPN SSANVADYMG HMAMAMGKLG TLENFLRQAD LLRQQTLQQL HRILTTRQAA  420
RAFLVIHDYI SRLRALSSLW LARPRD*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0085860.0BT008586.1 Arabidopsis thaliana clone U50929 putative bZIP transcription factor, PERIANTHIA (At1g68640) mRNA, complete cds.
GenBankAK1182860.0AK118286.1 Arabidopsis thaliana At1g68640 mRNA for putative bZip transcription factor PERIANTHIA (PAN) / AtbZip46, complete cds, clone: RAFL19-57-M21.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006391115.10.0hypothetical protein EUTSA_v10018547mg
SwissprotQ9SX270.0PAN_ARATH; Transcription factor PERIANTHIA
TrEMBLV4MB250.0V4MB25_EUTSA; Uncharacterized protein
STRINGBra004329.1-P0.0(Brassica rapa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM66728133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68640.10.0bZIP family protein