PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Thhalv10017050m
Common NameEUTSA_v10017050mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
Family bZIP
Protein Properties Length: 282aa    MW: 31754.7 Da    PI: 8.2686
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Thhalv10017050mgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_152.97.9e-17211259554
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 
                      +r++r++kNRe+A rsR+RK+a++ eLe kv +Le+eN++L+ +l+e +k
  Thhalv10017050m 211 RRQKRMIKNRESAARSRARKQAYTHELEIKVSSLEEENEKLR-RLKEVEK 259
                      79***************************************9.8877776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.4E-14205253No hitNo description
SMARTSM003385.9E-11207263IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.174209253IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.06E-10211253No hitNo description
PfamPF001703.0E-14211254IPR004827Basic-leucine zipper domain
CDDcd147071.13E-21211256No hitNo description
PROSITE patternPS000360214229IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    Send to blast
MGSLRGNVEE PISQSLPRQN SLYSLKLHEV QNHLGSSAKP LGSMNLDELL KSVWSAEANQ  60
PPEATEEGIS RQGSLTLPRD LSKKTVDEVW RDIQQDNNGS SHGERRDSNN KQPTLGEITL  120
EDLLLKAGVV TETLVPQNVV SIASNGQWVQ YHQPQHQHHH QGFMPYPVCE MQEMVSPTSL  180
MMGGLSDTQQ AHGRKRVASS GGEFVEKTVE RRQKRMIKNR ESAARSRARK QAYTHELEIK  240
VSSLEEENEK LRRLKEVEKI LPNEPPPDPK WKLRRTSSAC F*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0251751e-105BT025175.1 Arabidopsis thaliana At2g41070 mRNA, complete cds.
GenBankAY0846681e-105AY084668.1 Arabidopsis thaliana clone 114632 mRNA, complete sequence.
GenBankAK1181131e-105AK118113.1 Arabidopsis thaliana At2g41070 mRNA for putative bZIP transcription factor AtbZIP12 / DPBF4, complete cds, clone: RAFL19-38-L08.
GenBankAJ4208811e-105AJ420881.1 Arabidopsis thaliana partial mRNA for basic leucine zipper transcription factor (atbzip12 gene).
GenBankAF3342091e-105AF334209.1 Arabidopsis thaliana bZIP protein DPBF4 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006411374.10.0hypothetical protein EUTSA_v10017050mg
SwissprotQ9C5Q21e-150AI5L3_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 3
TrEMBLV4MCB10.0V4MCB1_EUTSA; Uncharacterized protein
STRINGBra004597.1-P1e-159(Brassica rapa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM18842883
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41070.31e-132bZIP family protein