PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Thhalv10016740m
Common NameEUTSA_v10016740mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
Family bZIP
Protein Properties Length: 407aa    MW: 42698.9 Da    PI: 5.2887
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Thhalv10016740mgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_173.62.8e-23300362163
                      XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                      ++elkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L++eN++L+ e+++lk ++++l +e+
  Thhalv10016740m 300 DRELKRQRRKQSNRESARRSRLRKQAECDELAQRAEVLSEENTSLRAEINKLKSQCEELSAEN 362
                      689********************************************************9987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077773.6E-291102IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165968.5E-47141269No hitNo description
Gene3DG3DSA:1.20.5.1701.8E-18293359No hitNo description
SMARTSM003384.7E-21300364IPR004827Basic-leucine zipper domain
PfamPF001709.5E-21301362IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.254302365IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.69E-11303358No hitNo description
CDDcd147022.16E-24305355No hitNo description
PROSITE patternPS000360307322IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 407 aa     Download sequence    Send to blast
MASSEMDKSS KEKEPKTPPS SSSAPPSSQE PSSAVSAGMA TPDWSGFQAY SPMPPHGYVA  60
SSPQPHPYMW GVQHMMPPYG TPPHPYVAMY PPGGMYAHPS MPPGSYPYSP YAMPSPNGMT  120
EASGNTTGGT EGEAKQSDVK EKLPIKRSRG SLGSLNMITG KNNEPGKNSG GSANGAYSKS  180
GESASDGSSE GSDANSQNDS GSGQDGKDVA SENGGSANGP RNGSVGTPLL PVSQTVPIMP  240
MTAAGVPGPP TNLNIGMDYW GAPTSSAIPG MHGKVSTPVP GVVAPGSRDG GHSQPWLQDD  300
RELKRQRRKQ SNRESARRSR LRKQAECDEL AQRAEVLSEE NTSLRAEINK LKSQCEELSA  360
ENTSLKDQLL SFPPLEGINM DKDDGEPDSN QTGVAETKVD AYKESM*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1316322RRSRLRK
2316323RRSRLRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00291DAPTransfer from AT2G35530Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3531640.0AK353164.1 Thellungiella halophila mRNA, complete cds, clone: RTFL01-26-I15.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006410711.10.0hypothetical protein EUTSA_v10016740mg
SwissprotQ501B20.0BZP16_ARATH; bZIP transcription factor 16
TrEMBLV4M7990.0V4M799_EUTSA; Uncharacterized protein
STRINGAT2G35530.10.0(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM37012557
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.10.0basic region/leucine zipper transcription factor 16