PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Thhalv10014082m
Common NameEUTSA_v10014082mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
Family bZIP
Protein Properties Length: 331aa    MW: 36732.3 Da    PI: 9.411
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Thhalv10014082mgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.67.3e-104686545
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
                     k  rr+++NReAAr+sR+RKka++++Le+   +L++  ++L
  Thhalv10014082m 46 KTLRRLAQNREAARKSRLRKKAYVQQLENSRLKLTQLEQEL 86
                     7889************************9877777766555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1706.2E-83689No hitNo description
SMARTSM003384.5E-742105IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.4384488IPR004827Basic-leucine zipper domain
PfamPF001706.9E-74686IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.94E-74689No hitNo description
PROSITE patternPS0003604964IPR004827Basic-leucine zipper domain
PfamPF141441.6E-34128203IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    Send to blast
MADTSPRTDV STDGDTDHRD LGSEGALLNT AASDSSDRSK DKLDQKTLRR LAQNREAARK  60
SRLRKKAYVQ QLENSRLKLT QLEQELQRAR QQGVFISSTG DQAHSTGGNG ALAFDAEHSR  120
WLEEKNKQMN ELRSALNAHA GDAELRTIID GVMAHYEELF RIKSNAAKND VFHLLSGMWK  180
TPAERCFLWL GGFRSSELLK LLANQLEPMT ERQMMGINSL QQTSQQAEDA LSQGMESLQQ  240
SLADTLSSGS LGSSSSGNVA SYMGQMAMAM GKLGTLEGFI RQADNLRLQT LQQMIRVLTT  300
RQSARAILAI HDYFSRLRAL SSLWLARPRE *
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00492DAPTransfer from AT5G06950Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3531250.0AK353125.1 Thellungiella halophila mRNA, complete cds, clone: RTFL01-10-O14.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006399172.10.0hypothetical protein EUTSA_v10014082mg
SwissprotQ391400.0TGA6_ARATH; Transcription factor TGA6
TrEMBLE4MX780.0E4MX78_EUTHA; mRNA, clone: RTFL01-10-O14
TrEMBLV4KRR30.0V4KRR3_EUTSA; Uncharacterized protein
STRINGfgenesh2_kg.6__644__AT5G06950.10.0(Arabidopsis lyrata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM66728133
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.20.0TGACG motif-binding factor 6