PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Thhalv10011634m
Common NameEUTSA_v10011634mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
Family bZIP
Protein Properties Length: 339aa    MW: 37387.5 Da    PI: 8.5008
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Thhalv10011634mgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.29.6e-10193251563
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                      kr++r   NR +A rs +RK  ++ eLe+kv++L++e ++L  ++ +l+   ++l +e+
  Thhalv10011634m 193 KRAKRILANRQSAARSKERKIRYTGELERKVQTLQNEATTLSAQVTMLQRGTSELNTEN 251
                      9***********************************************99999988887 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.5E-14189253IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.645191254IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.48E-10193243No hitNo description
PfamPF001703.0E-8193251IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.5E-10193248No hitNo description
CDDcd147034.36E-21194242No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0007231Biological Processosmosensory signaling pathway
GO:0008272Biological Processsulfate transport
GO:0009294Biological ProcessDNA mediated transformation
GO:0009652Biological Processthigmotropism
GO:0009970Biological Processcellular response to sulfate starvation
GO:0045596Biological Processnegative regulation of cell differentiation
GO:0051170Biological Processnuclear import
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003682Molecular Functionchromatin binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0043621Molecular Functionprotein self-association
GO:0051019Molecular Functionmitogen-activated protein kinase binding
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    Send to blast
MEPSLRPNQS SILSEIERMP EAPRQRISHH RRARSDTFFS GESIDDLLLF DPSDVDFSSL  60
DFLNAPTPQP PQQPQPSPMS VDSPPEETSS NGAPPIPLPP GRHVRSFSVD SESDFFDDLA  120
AEDNHQFAGK SSSSSSLAKR GHHRSNSMDG ATSSGSFNMQ SILAAVSCKD GGAKKSMGMA  180
SDRLAELALL DPKRAKRILA NRQSAARSKE RKIRYTGELE RKVQTLQNEA TTLSAQVTML  240
QRGTSELNTE NKHLKMRLQA LEQQAELRDA LNEALREELN RLKIAAGEIP QGNGNSYNRA  300
QFSSQQSTMN QFVNNKNQQM STNGQPSRPS FMDFTKRG*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00184DAPTransfer from AT1G43700Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAY0858570.0AY085857.1 Arabidopsis thaliana clone 19086 mRNA, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006393774.10.0hypothetical protein EUTSA_v10011634mg
SwissprotQ9MA751e-177VIP1_ARATH; Transcription factor VIP1
TrEMBLV4JZT10.0V4JZT1_EUTSA; Uncharacterized protein
STRINGBra032191.1-P0.0(Brassica rapa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM79932639
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43700.11e-150VIRE2-interacting protein 1