PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Thhalv10008825m
Common NameEUTSA_v10008825mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
Family bZIP
Protein Properties Length: 198aa    MW: 22822 Da    PI: 5.3789
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Thhalv10008825mgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_141.82.3e-1387137555
                      CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                      +++rr+++NRe+ArrsR RK+  ++eL   v  L + N+ L+++l++ ++ 
  Thhalv10008825m  87 RKQRRMISNRESARRSRMRKQRHLDELWSQVMRLRTDNHCLIDKLNRVSES 137
                      79*******************************************998875 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.9E-1483147IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.20885137IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1706.7E-1185137No hitNo description
SuperFamilySSF579595.81E-1287136No hitNo description
PfamPF001702.4E-1187137IPR004827Basic-leucine zipper domain
CDDcd147021.62E-1788138No hitNo description
PROSITE patternPS00036090105IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0042803Molecular Functionprotein homodimerization activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    Send to blast
MNTIPAELTG LFQYVSSEKY NNQTPIMESE YFNMPSSPTS SSSFYYINGL INNNNNYSSS  60
SNGQDLMTSN NSTSDEDHQQ SMVIDERKQR RMISNRESAR RSRMRKQRHL DELWSQVMRL  120
RTDNHCLIDK LNRVSESHEL ALKENAKLKE ETSDLRQLIS EIKSNNEDDG SFLRELEDSI  180
STSRSDSNQR GRDFGLC*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
199106RRSRMRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankF21F230.0AC027656.4 Sequence of BAC F21F23 from Arabidopsis thaliana chromosome 1, complete sequence.
GenBankAC0271340.0AC027134.4 Arabidopsis thaliana chromosome I BAC F13B4 genomic sequence, complete sequence.
GenBankCP0026840.0CP002684.1 Arabidopsis thaliana chromosome 1 sequence.
GenBankAF3324300.0AF332430.1 Arabidopsis thaliana clone C00105 (e) putative bZIP transcription factor (At1g13600) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006417112.11e-143hypothetical protein EUTSA_v10008825mg
SwissprotQ9FMC22e-36BZP43_ARATH; Basic leucine zipper 43
TrEMBLV4KCJ71e-143V4KCJ7_EUTSA; Uncharacterized protein
STRINGAT1G13600.11e-119(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM28922469
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13600.11e-115basic leucine-zipper 58