PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Thhalv10007944m
Common NameEUTSA_v10007944mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
Family bZIP
Protein Properties Length: 377aa    MW: 42755.9 Da    PI: 6.1954
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Thhalv10007944mgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.81.3e-0989129444
                      XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNka 44 
                      +k  rr+++NReAAr+sR+RKka +++Lee   +L++  ++
  Thhalv10007944m  89 DKMKRRLAQNREAARKSRLRKKAHVQQLEESRLKLSQLEQE 129
                      7999*************************987777766555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.6E-879130No hitNo description
SMARTSM003380.001486144IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.34788130IPR004827Basic-leucine zipper domain
PfamPF077162.2E-590135IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.38E-690132No hitNo description
PROSITE patternPS00036093108IPR004827Basic-leucine zipper domain
PfamPF141442.7E-28177251IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009862Biological Processsystemic acquired resistance, salicylic acid mediated signaling pathway
GO:0042742Biological Processdefense response to bacterium
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005516Molecular Functioncalmodulin binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    Send to blast
MMSSSSSTQV VLFRDMGMYE PFQQLSGWEN AFSTITSNQN NNESSSTVLE VDARAEADNN  60
NKANYTSLYN SVEAEPSSNN DQDDDQINDK MKRRLAQNRE AARKSRLRKK AHVQQLEESR  120
LKLSQLEQEL VRARQQGLCV RNSSDTSYLG PAGTMNTGIA AFEMEYTHWL EEQNRRVSEI  180
RTAIQAHISD IELRMLVDIC LNHYANLFRM KADAAKADVF FLISGMWRTS TERFFQWIGG  240
FRPSELLNVV MPYVEPLTDQ QILEVRNLQQ SSQQAEEALS QGLDKLQQGL VESIAGEIRV  300
VESVNHGAHM ASAMENLQAL EGFVNQADHL RHQTLQQMSK ILTTRQAARG LLALGEYFHR  360
LRALSSLWAA RPREHT*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00157DAPTransfer from AT1G22070Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3525940.0AK352594.1 Thellungiella halophila mRNA, complete cds, clone: RTFL01-01-F17.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006416233.10.0hypothetical protein EUTSA_v10007944mg
SwissprotQ392340.0TGA3_ARATH; Transcription factor TGA3
TrEMBLV4MS250.0V4MS25_EUTSA; Uncharacterized protein
STRINGAT1G22070.10.0(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM30612766
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22070.10.0TGA1A-related gene 3