PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Thhalv10007500m
Common NameEUTSA_v10007490mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
Family bZIP
Protein Properties Length: 484aa    MW: 53829.4 Da    PI: 8.0928
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Thhalv10007500mgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.83e-10179220445
                      XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                       k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  Thhalv10007500m 179 AKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLSQLEQEL 220
                      6889*************************8766666655544 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.2E-6176253IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.289178222IPR004827Basic-leucine zipper domain
PfamPF001702.0E-7179220IPR004827Basic-leucine zipper domain
CDDcd147083.55E-23180232No hitNo description
SuperFamilySSF579599.64E-7180222No hitNo description
Gene3DG3DSA:1.20.5.1701.0E-7181224No hitNo description
PROSITE patternPS000360183198IPR004827Basic-leucine zipper domain
PfamPF141442.3E-28261336IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 484 aa     Download sequence    Send to blast
MANHRVISDN ATNHNHNHHL SYSLLHGLNN NPPPPGFINQ DGSSSFDFGE LEEAIVLQGV  60
KYRNDEAKPR GGGATTLEMF PSWPIRTHQT LPTESSKSGG ESTDSGSANF SGKAESQQPE  120
SPMSSKENHH LMLQHHNNNN NMTNSSSTSG LPSTSRTPAT PKPSEDKRKA TTSGKQLDAK  180
TLRRLAQNRE AARKSRLRKK AYVQQLESSR IKLSQLEQEL QRARSQGLFM GGCGPPGPNI  240
TSGAAIFDME YGRWLEDDNR HMSEIRTGLQ AHLSDNDLRL IVDGYITHFD EILRLKAVAA  300
KADVFHLIIG TWMSPAERCF IWIAGFRPSD LIKILVSQMD LLTEQQLMGI YGLQHSSQQA  360
EEALSQGLEQ LQHSLIDTLA ASPVIDGMQQ MAVALGKLSN LEGFIRQADN LRQQTVHQLR  420
RILTVRQAAR CFLVIGEYYG RLRALSSLWL SRPRETLISD ETSCQTTTDL QIVQSSRNHF  480
SNF*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00131DAPTransfer from AT1G08320Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ1327430.0HQ132743.1 Arabidopsis thaliana bZIP21 (At1g08320) mRNA, complete cds.
GenBankAJ3147570.0AJ314757.1 Arabidopsis thaliana mRNA for bZIP transcription factor (AtbZIP21 gene).
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006417704.10.0hypothetical protein EUTSA_v10007490mg
SwissprotO241601e-127TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLV4L1A30.0V4L1A3_EUTSA; Uncharacterized protein
STRINGBra018634.1-P0.0(Brassica rapa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.30.0bZIP family protein