PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Thhalv10007490m
Common NameEUTSA_v10007490mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
Family bZIP
Protein Properties Length: 488aa    MW: 54158.8 Da    PI: 7.8148
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Thhalv10007490mgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.83.1e-10183224445
                      XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                       k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  Thhalv10007490m 183 AKTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLSQLEQEL 224
                      6889*************************8766666655544 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.2E-6180257IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.289182226IPR004827Basic-leucine zipper domain
PfamPF001702.0E-7183224IPR004827Basic-leucine zipper domain
CDDcd147081.67E-23184236No hitNo description
SuperFamilySSF579599.64E-7184226No hitNo description
Gene3DG3DSA:1.20.5.1701.0E-7185228No hitNo description
PROSITE patternPS000360187202IPR004827Basic-leucine zipper domain
PfamPF141442.3E-28265340IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 488 aa     Download sequence    Send to blast
MANHRVISDN ATNHNHNHHL SYSLLHGLNN NPPPPGFINQ DGSSSFDFGE LEEAIVLQGV  60
KYRNDEAKPP LFAGGGGATT LEMFPSWPIR THQTLPTESS KSGGESTDSG SANFSGKAES  120
QQPESPMSSK ENHHLMLQHH NNNNNMTNSS STSGLPSTSR TPATPKPSED KRKATTSGKQ  180
LDAKTLRRLA QNREAARKSR LRKKAYVQQL ESSRIKLSQL EQELQRARSQ GLFMGGCGPP  240
GPNITSGAAI FDMEYGRWLE DDNRHMSEIR TGLQAHLSDN DLRLIVDGYI THFDEILRLK  300
AVAAKADVFH LIIGTWMSPA ERCFIWIAGF RPSDLIKILV SQMDLLTEQQ LMGIYGLQHS  360
SQQAEEALSQ GLEQLQHSLI DTLAASPVID GMQQMAVALG KLSNLEGFIR QADNLRQQTV  420
HQLRRILTVR QAARCFLVIG EYYGRLRALS SLWLSRPRET LISDETSCQT TTDLQIVQSS  480
RNHFSNF*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00131DAPTransfer from AT1G08320Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ1327430.0HQ132743.1 Arabidopsis thaliana bZIP21 (At1g08320) mRNA, complete cds.
GenBankAJ3147570.0AJ314757.1 Arabidopsis thaliana mRNA for bZIP transcription factor (AtbZIP21 gene).
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006417705.10.0hypothetical protein EUTSA_v10007490mg
SwissprotO241601e-127TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLV4L8H90.0V4L8H9_EUTSA; Uncharacterized protein
STRINGBra018634.1-P0.0(Brassica rapa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM55242441
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.30.0bZIP family protein