PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Thhalv10005532m
Common NameEUTSA_v10005532mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
Family bZIP
Protein Properties Length: 142aa    MW: 16001.8 Da    PI: 9.8681
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Thhalv10005532mgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1223.7e-071581463
                     XCHHHCHHHHHHHHHHHHHHHHHHHH.......HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeie.......eLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                      k+ +rk +NRe+ArrsR++K++ +e        Le+++ke ++  +a k++l++ + e a lkse+
  Thhalv10005532m 15 EKKRKRKLSNRESARRSRLKKQKLMEdtineisSLERRIKENSERYRAAKQRLDSVESENAVLKSEK 81
                     5999******************976522222226888888888888889999999999999888876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.9E-81095No hitNo description
SMARTSM003383.6E-71276IPR004827Basic-leucine zipper domain
PfamPF077163.1E-51453IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.1171477IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.08E-61660No hitNo description
CDDcd147022.23E-121768No hitNo description
PROSITE patternPS0003601934IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006521Biological Processregulation of cellular amino acid metabolic process
GO:0009267Biological Processcellular response to starvation
GO:0009617Biological Processresponse to bacterium
GO:0009651Biological Processresponse to salt stress
GO:0009901Biological Processanther dehiscence
GO:0010182Biological Processsugar mediated signaling pathway
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071333Biological Processcellular response to glucose stimulus
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 142 aa     Download sequence    Send to blast
MANAEKTSSG SDIDEKKRKR KLSNRESARR SRLKKQKLME DTINEISSLE RRIKENSERY  60
RAAKQRLDSV ESENAVLKSE KTWLSSYVSD LENMIATTSL TLTQSGGDDQ NANAEIAAGD  120
CRRRPWQLSC DSLQPVTSFK T*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11421EKKRKRKL
21520KKRKRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3527590.0AK352759.1 Thellungiella halophila mRNA, complete cds, clone: RTFL01-02-E19.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006395062.13e-98hypothetical protein EUTSA_v10005532mg
SwissprotQ9FGX23e-86BZIP1_ARATH; Basic leucine zipper 1
TrEMBLE4MW623e-98E4MW62_EUTHA; mRNA, clone: RTFL01-02-E19
TrEMBLV4KY623e-98V4KY62_EUTSA; Uncharacterized protein
STRINGAT5G49450.17e-84(Arabidopsis thaliana)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM125812231
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49450.12e-87basic leucine-zipper 1