PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010943591.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family C2H2
Protein Properties Length: 146aa    MW: 16601.9 Da    PI: 7.2139
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010943591.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.80.00035628123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    y C+ C+k F +  +L  H+ +H
  XP_010943591.1  6 YICSFCNKAFQTLQSLGGHQTSH 28
                    89*****************9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576675.33E-7431No hitNo description
Gene3DG3DSA:3.30.160.601.5E-5531IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PfamPF139121.4E-9631IPR007087Zinc finger, C2H2
PROSITE profilePS5015710.596633IPR007087Zinc finger, C2H2
PROSITE patternPS000280828IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    Send to blast
MAGPPYICSF CNKAFQTLQS LGGHQTSHRR EIKEMRKQHE TFMEAQHLRP RPLRASSGSP  60
GMRMVPLTPN YAYWEALRAA DQSPVVINFM EIHSPEVSQQ HPQPSQMYKM APSSEETITD  120
PMLTLWGEVH RGEEVNSVNP DVTLKL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010943591.11e-107transcriptional regulator SUPERMAN-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2080966
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05120.12e-08C2H2 family protein