PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010943442.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bZIP
Protein Properties Length: 415aa    MW: 43878.8 Da    PI: 6.296
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010943442.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_170.82e-22302364163
                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     e+elkr+rrkq+NRe+ArrsR+RK+ae+eeL++++++L++eN++L+ e+++++ke+++l s++
  XP_010943442.1 302 ERELKRQRRKQSNRESARRSRLRKQAECEELAQRADSLKEENSSLRAEVNRIRKEYEQLLSQN 364
                     89**********************************************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.5E-32198IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165964.2E-50136274No hitNo description
Gene3DG3DSA:1.20.5.1709.6E-20295363No hitNo description
PfamPF001701.3E-20302364IPR004827Basic-leucine zipper domain
SMARTSM003381.0E-22302366IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.679304367IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.75E-11305362No hitNo description
CDDcd147027.53E-25307357No hitNo description
PROSITE patternPS000360309324IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 415 aa     Download sequence    Send to blast
MGNSEADTSA KTPKTSASQD GSPASSASPA ATVFPDWTSF QAYSPIPPHG FFHSSVASSP  60
QAHPYMWGAQ QFMPPYGTPP HPYVMYPPGG LYAHPSMPPG SHPFNPYAMP SPNGNAETGA  120
VPGGTEMDGK SSEGKERSPL KRSKGSLGSL NMITGKNNNE PGKTSGASAN GGFSQSGESG  180
TESSSEGSDA NSQNDSQPKT SGGQESFDET SHRGNHTPGS QNGGTRMLSQ AVLGQTIPIM  240
PMPAAGATSG VAGPTTNLNI GMDYWGAPSS SSLPPMHGKV PASAVAGAVV PGAPSELWMQ  300
DERELKRQRR KQSNRESARR SRLRKQAECE ELAQRADSLK EENSSLRAEV NRIRKEYEQL  360
LSQNTSLKER LGEMQQGTDN PRLDGDEQNS GDDNHKRHSD SDAQAGEKDP VQSGL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1318324RRSRLRK
2318325RRSRLRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00291DAPTransfer from AT2G35530Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010943442.10.0PREDICTED: transcription factor HBP-1a-like isoform X1
RefseqXP_010943443.10.0PREDICTED: transcription factor HBP-1a-like isoform X1
RefseqXP_010943444.10.0PREDICTED: transcription factor HBP-1a-like isoform X1
SwissprotQ501B21e-146BZP16_ARATH; bZIP transcription factor 16
TrEMBLM0SL200.0M0SL20_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr4P04530_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21473796
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.11e-129basic region/leucine zipper transcription factor 16