PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010941463.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family GeBP
Protein Properties Length: 406aa    MW: 44335.5 Da    PI: 5.3578
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010941463.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573115.14.2e-36130227397
          DUF573   3 fqrlwseeDeivlLqGlidfkaktgk...spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskk 94 
                     fq+lw++ Dei++LqG+++f++++g+   ++++d+  fy+++k++++++++k+qlveK+rrLKkK++++v++++ gke +f+++hd+ +fe+++k
  XP_010941463.1 130 FQKLWTDADEITILQGFLEFTSQRGTthaNYQHDTGPFYDQIKGRLQLDFNKNQLVEKLRRLKKKYRNMVSRIAAGKESVFKSPHDKATFEIARK 224
                     9************************98867777************************************************************** PP

          DUF573  95 iWg 97 
                     iW 
  XP_010941463.1 225 IWS 227
                     **7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.7E-33130227IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 406 aa     Download sequence    Send to blast
MMASTAEDDE HDAAVYDEDD SDSDSDSDDG VDSEEYDDDV VDGHSAALPP PPVPAAAADQ  60
QILRSSSSSV VPNPNPNPSA SSPIPQNGAG GAGWGVAFVA SPDGKRQRIS PPVDERKPPA  120
VAYDESRRIF QKLWTDADEI TILQGFLEFT SQRGTTHANY QHDTGPFYDQ IKGRLQLDFN  180
KNQLVEKLRR LKKKYRNMVS RIAAGKESVF KSPHDKATFE IARKIWSPSF KRTRNRDSCN  240
APNCQLQERS NLVPVEVAED VLLSSDQMMS RSRRKRSEGE VAREMQLAVA TPVVSVPVVQ  300
QTPRSSAPIP NASLIEQTVK SCLSPLFKEL LQHAIGGPCA PGGAGDGGAA PNPLLLSGAG  360
GSGAVQVDEK WRKQQILELE VYLKRVELVH EQVKSKLEEL RSMGRS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010941463.10.0probable transcription factor At3g04930
TrEMBLA0A2H3ZI450.0A0A2H3ZI45_PHODC; probable transcription factor At3g04930
STRINGXP_008777017.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP97437123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28040.19e-57DNA-binding storekeeper protein-related transcriptional regulator