PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010939994.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bZIP
Protein Properties Length: 395aa    MW: 41830.1 Da    PI: 7.1281
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010939994.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_160.53.5e-19305367163
                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     e+elkr++rkq+NRe+ArrsR+RK+ae eeL++ +++L++eN  Lk+ele+++ e+ k++se+
  XP_010939994.1 305 ERELKRQKRKQSNRESARRSRLRKQAEYEELTNHAETLKEENNLLKEELERMQVECRKMTSEN 367
                     89***********************************************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.8E-30198IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165961.1E-35138266No hitNo description
Gene3DG3DSA:1.20.5.1702.7E-15301364No hitNo description
SMARTSM003382.0E-16305369IPR004827Basic-leucine zipper domain
PfamPF001709.6E-17305367IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.3307370IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.75E-10308364No hitNo description
CDDcd147025.78E-23310361No hitNo description
PROSITE patternPS000360312327IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 395 aa     Download sequence    Send to blast
MGSGEVTTPT ETQKSTSTQE KPPSSPAVVY PDWASFQAYY NATGTPMPPP GFLHSPVALS  60
PQGHPYLWGP QMLPSYGTPP PYVAMYPHGG LYPHPSIPPG SYPYSPFATP SSNGTAEASV  120
AGASGAETDG KLHAGKQRSP LKKSRGSLGS LNMLTGKVND TRHASGASAN GAFSQSGESG  180
SEVSSEGSDA DSQNGSQQRH GSEHGSGNEG ANKASGARTT SNEVTQTLPT PAVLNATVPF  240
VAIPPGGLAG PATTLNIGMD YWGGPAPISA VRGKLSAASS TALLVPSSHE GSRDRVPPDC  300
SKQDERELKR QKRKQSNRES ARRSRLRKQA EYEELTNHAE TLKEENNLLK EELERMQVEC  360
RKMTSENATL TEKLKIHWGK ESREDEQVDP VNGGG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1321327RRSRLRK
2321328RRSRLRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010939994.10.0PREDICTED: transcription factor HBP-1a-like isoform X1
SwissprotQ501B21e-103BZP16_ARATH; bZIP transcription factor 16
TrEMBLU5CZF71e-121U5CZF7_AMBTC; Uncharacterized protein
STRINGSb01g041480.11e-112(Sorghum bicolor)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP115063238
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.12e-72basic region/leucine zipper transcription factor 16