PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010939598.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bZIP
Protein Properties Length: 365aa    MW: 40893.4 Da    PI: 8.8557
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010939598.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.35.3e-1175117241
                     XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS
          bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 
                     +++k+ rr+++NReAAr+sR+RKka++++Le    k ++Le+e
  XP_010939598.1  75 PADKVVRRLAQNREAARKSRLRKKAYVQQLESsriKLAQLEQE 117
                     6799**************************9722244555544 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.2E-771123No hitNo description
SMARTSM003384.0E-774137IPR004827Basic-leucine zipper domain
PfamPF001707.2E-876114IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.9176120IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.13E-778119No hitNo description
PROSITE patternPS0003608196IPR004827Basic-leucine zipper domain
PfamPF141444.5E-31165239IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    Send to blast
MSSTSAHFAT SRRMAVYQPN HQISMWGNSF KADISQNTGA STIVEADTKL DNRLEDIPRE  60
SLGPSKRYDQ EANKPADKVV RRLAQNREAA RKSRLRKKAY VQQLESSRIK LAQLEQELER  120
ARQQGVYIGG HLGDATLGLP GTVNSGVAAF EMEYGHWVEE QNRQTRELRA ALQAHVSDIE  180
LHMLVESGMS HYDDLFRIKA IAAKSDVFYL MSGMWKTAVE RFFLWIGGFR PSELLKVLTS  240
QLDPLTEQQL VAVHNLQLSS QQAEYALSQG MDRLQQTIVE TLASDLLGAS GAANCMGQMA  300
NAMGELEALV SFVNQADHLR QQALQQMYKI LTTRQAARAL LALGDYFQRL RALSSLWAAR  360
PREPA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010939598.10.0PREDICTED: transcription factor TGA1-like isoform X2
SwissprotQ392371e-161TGA1_ARATH; Transcription factor TGA1
TrEMBLM0SZ420.0M0SZ42_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr5P16630_0010.0(Musa acuminata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65210.51e-137bZIP family protein