PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010939597.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bZIP
Protein Properties Length: 382aa    MW: 42698.4 Da    PI: 9.1764
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010939597.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.25.6e-1192134241
                     XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS
          bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 
                     +++k+ rr+++NReAAr+sR+RKka++++Le    k ++Le+e
  XP_010939597.1  92 PADKVVRRLAQNREAARKSRLRKKAYVQQLESsriKLAQLEQE 134
                     6799**************************9722244555544 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.3E-788140No hitNo description
SMARTSM003384.0E-791154IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.9193137IPR004827Basic-leucine zipper domain
PfamPF001707.7E-893131IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.21E-795136No hitNo description
PROSITE patternPS00036098113IPR004827Basic-leucine zipper domain
PfamPF141444.9E-31182256IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 382 aa     Download sequence    Send to blast
MQRGPARALH VNSSPDSMSS TSAHFATSRR MAVYQPNHQI SMWGNSFKAD ISQNTGASTI  60
VEADTKLDNR LEDIPRESLG PSKRYDQEAN KPADKVVRRL AQNREAARKS RLRKKAYVQQ  120
LESSRIKLAQ LEQELERARQ QGVYIGGHLG DATLGLPGTV NSGVAAFEME YGHWVEEQNR  180
QTRELRAALQ AHVSDIELHM LVESGMSHYD DLFRIKAIAA KSDVFYLMSG MWKTAVERFF  240
LWIGGFRPSE LLKVLTSQLD PLTEQQLVAV HNLQLSSQQA EYALSQGMDR LQQTIVETLA  300
SDLLGASGAA NCMGQMANAM GELEALVSFV NQADHLRQQA LQQMYKILTT RQAARALLAL  360
GDYFQRLRAL SSLWAARPRE PA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010939597.10.0PREDICTED: transcription factor TGA1-like isoform X1
SwissprotQ392371e-161TGA1_ARATH; Transcription factor TGA1
TrEMBLM0SZ420.0M0SZ42_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr5P16630_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP35713877
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65210.51e-136bZIP family protein