PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010939476.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 416aa    MW: 45009.8 Da    PI: 4.5271
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010939476.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.31.9e-184089255
             AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++ GVr+++ +grWvAeI+d      ++ r++lg+f+tae+Aa+a+++a+  l+g
  XP_010939476.1 40 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEDAARAYDEAACILRG 89
                    789******.7*********33....35***********************9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.35E-303996No hitNo description
Gene3DG3DSA:3.30.730.104.9E-274096IPR001471AP2/ERF domain
PfamPF008471.2E-124089IPR001471AP2/ERF domain
PROSITE profilePS5103219.3094097IPR001471AP2/ERF domain
SMARTSM003801.9E-3440103IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-194097IPR016177DNA-binding domain
PRINTSPR003671.1E-74152IPR001471AP2/ERF domain
PRINTSPR003671.1E-76379IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 416 aa     Download sequence    Send to blast
MVRKRKCADE ANDGEPPSSS WEEVAAAAAA LGGARRARKR FVGVRQRPSG RWVAEIKDTI  60
QKIRVWLGTF DTAEDAARAY DEAACILRGA NTRTNFWPCS PSQPAGPPAL PSKITNLLLT  120
RLRARNNSGF AESQQQAVQQ LQPVQQQLYG TTANEGGDIQ FTDFINDPTE SMSNLTHCSD  180
GGGDHMCHYL ENWGDQGGVG EGELGLGYNY LEEVGHFGEC GEGVHQEEGD GEMGMMDFQF  240
MDAVEGSSSS FFSPFEMVEE IEEPIEQESG EDEPSMIRAA MKRMKYERKV SASLYALNGI  300
SECLRLKLGG RNGGELMANH LSSLRNACRK QKQEEVVKVV DGGSVQVPVE NPHIQSQSES  360
TSSSLLCSSS SPISSSSSSS SPPPPQPPPS SASTLSNDGE SSLWSSLDLP PICYVA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010939476.10.0uncharacterized protein LOC105058290
TrEMBLA0A2H3XAR30.0A0A2H3XAR3_PHODC; ethylene-responsive transcription factor ERN1-like
STRINGXP_008781042.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP54823052
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.17e-21related to AP2 11