PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010938013.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bZIP
Protein Properties Length: 326aa    MW: 35117.4 Da    PI: 6.869
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010938013.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.92.9e-10192237550
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                     kr++r   NR +A rs +RK  +i eLe+kv++L++e ++L  +l 
  XP_010938013.1 192 KRAKRILANRHSAARSKERKARYISELERKVQALQTEATTLSAQLT 237
                     9****************************************98775 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.6E-14188252IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.507190253IPR004827Basic-leucine zipper domain
PfamPF001705.4E-9192236IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.97E-10192243No hitNo description
Gene3DG3DSA:1.20.5.1703.4E-10192245No hitNo description
CDDcd147033.01E-22193242No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    Send to blast
MLPKSQDPSH LPNPNPSTNL NLSSTFPPNA PAVAAGAVAM FQSAGPAASP RGVHHRRARS  60
ELAFRVPDDL DLSSGDPLEG GSFDIGLEDD LFCAFMDIEK IGCRLEGSGS GSEGGVCRDR  120
AAESSEGGED RKIGNAAGAV AVRPKHRHSN SIDGSSMSSG TTRGEGVFGE VVEAKKAMTA  180
EELAELAAID PKRAKRILAN RHSAARSKER KARYISELER KVQALQTEAT TLSAQLTLFQ  240
RDTTGLSAEN AELKLRLQAM EQQAQLRDVC RHVEVRWRPM LLEGGLLFYR QQWSGDGCGN  300
VRKLTSTPSS WFLSSINTCL LEASES
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010938013.10.0PREDICTED: transcription factor RF2b-like isoform X4
SwissprotQ6S4P43e-82RF2B_ORYSJ; Transcription factor RF2b
TrEMBLA0A0E0KDF44e-87A0A0E0KDF4_ORYPU; Uncharacterized protein
STRINGGSMUA_Achr6P32530_0014e-84(Musa acuminata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40620.16e-53bZIP family protein