PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010938012.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bZIP
Protein Properties Length: 336aa    MW: 35679 Da    PI: 7.1552
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010938012.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.24.7e-10192238551
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 
                     kr++r   NR +A rs +RK  +i eLe+kv++L++e ++L  +l  
  XP_010938012.1 192 KRAKRILANRHSAARSKERKARYISELERKVQALQTEATTLSAQLTL 238
                     9****************************************988765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.6E-14188252IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.507190253IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.0E-9192246No hitNo description
SuperFamilySSF579592.33E-10192243No hitNo description
PfamPF001706.6E-9192238IPR004827Basic-leucine zipper domain
CDDcd147031.91E-22193242No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    Send to blast
MLPKSQDPSH LPNPNPSTNL NLSSTFPPNA PAVAAGAVAM FQSAGPAASP RGVHHRRARS  60
ELAFRVPDDL DLSSGDPLEG GSFDIGLEDD LFCAFMDIEK IGCRLEGSGS GSEGGVCRDR  120
AAESSEGGED RKIGNAAGAV AVRPKHRHSN SIDGSSMSSG TTRGEGVFGE VVEAKKAMTA  180
EELAELAAID PKRAKRILAN RHSAARSKER KARYISELER KVQALQTEAT TLSAQLTLFQ  240
RDTTGLSAEN AELKLRLQAM EQQAQLRDAL NEALKQEVQR LKIATGEISN PGMWRCDGGQ  300
CFSKVGCSFI ASSGVGTAAV MFASSRQHLQ AGFFPA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010938012.10.0PREDICTED: transcription factor RF2b-like isoform X3
SwissprotQ6S4P42e-95RF2B_ORYSJ; Transcription factor RF2b
TrEMBLM0U9111e-101M0U911_MUSAM; Uncharacterized protein
STRINGGSMUA_AchrUn_randomP14020_0011e-100(Musa acuminata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40620.12e-65bZIP family protein