PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010937368.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 180aa    MW: 19606.9 Da    PI: 6.7913
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010937368.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP255.61.4e-172371355
             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++GVr +k +g+WvAe+r p++   rk+ +lg++  ae+Aa+a++aa  +l+g
  XP_010937368.1 23 FRGVRMRK-WGKWVAEVRLPRS---RKKLWLGSYADAEKAARAYDAALCCLKG 71
                    8*****99.**********854...4************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103221.182279IPR001471AP2/ERF domain
SMARTSM003805.0E-322285IPR001471AP2/ERF domain
PRINTSPR003672.4E-102334IPR001471AP2/ERF domain
SuperFamilySSF541711.31E-192380IPR016177DNA-binding domain
CDDcd000181.34E-252380No hitNo description
Gene3DG3DSA:3.30.730.101.2E-272380IPR001471AP2/ERF domain
PfamPF008471.6E-102371IPR001471AP2/ERF domain
PRINTSPR003672.4E-106181IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 180 aa     Download sequence    Send to blast
MEPGSGNQPQ TPTREEPTGP VPFRGVRMRK WGKWVAEVRL PRSRKKLWLG SYADAEKAAR  60
AYDAALCCLK GPNAVLNFPE RRPDIPSASN LSLLEIRAAA MAHAHDRPRR SVDQAGPAEA  120
GEVGRMEVAV VPGEPSPIYS PEINLTELPG EWNPGNGSGG DDDPAGTYSS PLWNHETRFN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-1322801473Ethylene-responsive transcription factor ERF096
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010937368.11e-129ethylene-responsive transcription factor RAP2-1-like
TrEMBLA0A2H3XPS22e-48A0A2H3XPS2_PHODC; ethylene-responsive transcription factor ERF017-like
STRINGXP_008786978.13e-49(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP86132144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.16e-22ERF family protein