PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010937367.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 310aa    MW: 34311.7 Da    PI: 8.6466
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010937367.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.13.4e-16147196255
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     ++kGVr +k +g+Wv+e+r p++   rk+ +lg++  ae+Aa+a++aa  +l+g
  XP_010937367.1 147 RFKGVRMRK-WGKWVVEVRLPRS---RKKLWLGSYADAEKAARAYDAAVYCLKG 196
                     69*****99.**********844...4************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000184.29E-22147205No hitNo description
PROSITE profilePS5103221.47147204IPR001471AP2/ERF domain
PfamPF008472.4E-9147196IPR001471AP2/ERF domain
SMARTSM003801.7E-28147210IPR001471AP2/ERF domain
PRINTSPR003677.2E-10148159IPR001471AP2/ERF domain
SuperFamilySSF541712.42E-18148205IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.105.4E-26148205IPR001471AP2/ERF domain
PRINTSPR003677.2E-10186206IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    Send to blast
MNFNGSVRDG RGDAGFIICD PDARMLAVGG CHLFEHSVLG AELHAAWIDI IFTRQQLHAE  60
RIFLEDDSAT VISWIQGGQR SACVTDRHVA RDIRFAAQFK SAHSRLLRPL PLSNPRKRIP  120
SSQRIMEPGS GNQPRTPRTE EPARAVRFKG VRMRKWGKWV VEVRLPRSRK KLWLGSYADA  180
EKAARAYDAA VYCLKGPDAV LNFPERRPDI PSASNLSLPE IRAAAMAHAH DRPRRSVDQA  240
GPAEAGEVGR TEVAVEHGDL SPIFSPEIST TAVHGMWNEE AEKPGNGSGG EDEIGDIYSS  300
SLWNFGTRFN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-121472041472Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019710022.20.0ethylene-responsive transcription factor ERF025-like
TrEMBLA0A2H3XPS28e-47A0A2H3XPS2_PHODC; ethylene-responsive transcription factor ERF017-like
STRINGXP_008786978.11e-47(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP86132144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.12e-22ERF family protein