PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010937339.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 144aa    MW: 16278.2 Da    PI: 7.5041
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010937339.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.82.1e-162364348
             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaia 48
                    y GVr+++ +gr++AeIr p++   + r++lg+f+taeeAa a++ 
  XP_010937339.1 23 YLGVRRRP-WGRYAAEIRNPYT---KERHWLGTFDTAEEAALAYDL 64
                    88******.**********865...5******************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003806.8E-252286IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.6E-252279IPR001471AP2/ERF domain
PROSITE profilePS5103220.2052280IPR001471AP2/ERF domain
CDDcd000182.88E-242379No hitNo description
PfamPF008476.4E-102364IPR001471AP2/ERF domain
PRINTSPR003674.1E-92334IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-182380IPR016177DNA-binding domain
PRINTSPR003674.1E-94561IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 144 aa     Download sequence    Send to blast
MADFPPVIFH RNRRRRSRAS TEYLGVRRRP WGRYAAEIRN PYTKERHWLG TFDTAEEAAL  60
AYDLSSIAFS GLARARTNFY YPFLAPPSPP PPPPPPPPSP QPEERDDCCF ESGSIEDDDS  120
MTIAAILQSF RHSSALSSSS SLLY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-1422791471Ethylene-responsive transcription factor ERF096
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
11017RNRRRRSR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010937339.11e-100ethylene-responsive transcription factor LEP-like
TrEMBLA0A2H3Z8542e-65A0A2H3Z854_PHODC; ethylene-responsive transcription factor LEP-like
STRINGXP_008809528.13e-66(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP18853397
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12890.12e-28ERF family protein