PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010936939.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family AP2
Protein Properties Length: 618aa    MW: 67004.1 Da    PI: 7.0649
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010936939.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP248.81.7e-15288347155
             AP2   1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     s+y+GV++++++gr++A+++d  +   g  ++ ++++lg ++ +e+Aa+a++ a++k++g
  XP_010936939.1 288 SQYRGVTRHRWTGRYEAHLWDnSCRkEGqtRKgRQVYLGGYDKEEKAARAYDLAALKYWG 347
                     78*******************655454478446*************************98 PP

2AP247.44.8e-15390441155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     s y+GV+++++ grW A+I  +     +k  +lg+f t eeAa+a++ a+ k++g
  XP_010936939.1 390 SVYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 441
                     78****************988532...5************************997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008475.9E-12288347IPR001471AP2/ERF domain
SuperFamilySSF541714.18E-17288357IPR016177DNA-binding domain
CDDcd000184.43E-22288357No hitNo description
SMARTSM003801.1E-29289361IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.7E-16289356IPR001471AP2/ERF domain
PROSITE profilePS5103219.177289355IPR001471AP2/ERF domain
PRINTSPR003673.7E-6290301IPR001471AP2/ERF domain
PfamPF008478.5E-10390441IPR001471AP2/ERF domain
SuperFamilySSF541711.31E-17390451IPR016177DNA-binding domain
CDDcd000189.22E-25390451No hitNo description
PROSITE profilePS5103219.045391449IPR001471AP2/ERF domain
SMARTSM003809.6E-34391455IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.6E-18391449IPR001471AP2/ERF domain
PRINTSPR003673.7E-6431451IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 618 aa     Download sequence    Send to blast
MEMSGWLGFS LSSSKGDVSC CGDEVFGGGA DGGGGGGEVG FGHHPLAGMP LRSDGSICFM  60
GPPFRPPPPA PHGASDWRYG GAIVTAPTSS NQEGKGPKLE DFLGGYSENA SEENQGHQPI  120
SNFHDMYYQS SGGPGINVNM PPSFSPVERG AKEDTQISYH FLQPCHQSNH SFQEIPTLKP  180
QFLDPTPNPG PNSLYNGGID GSTSISGIKS WLRQNQYVPG KQLAEPSECN FQSLTLSMSP  240
VMQSGSSEMV PISSSVAAAD GTKYPNAKST TREPIPRKSI ETFGQRTSQY RGVTRHRWTG  300
RYEAHLWDNS CRKEGQTRKG RQVYLGGYDK EEKAARAYDL AALKYWGPTT HINFPLSTYE  360
KELEEMKHMT RQEFVAHLRR KSSGFSRGAS VYRGVTRHHQ HGRWQARIGR VAGNKDLYLG  420
TFSTQEEAAE AYDIAAIKFR GVNAVTNFDI SKYDVKRICS SSHLITGDLA KRSPRDTPSP  480
SEPTEPDHRP TLAITNSGSV DVDDLSHMMW NSYNKSDPPS NQPSNGGAVP LVSPSMSNPN  540
AALDNKGESP RNSSSNEGAC GDFPQAFYFP NGMKYEGGEN VNGGSGGGGN MSWMVAAAAR  600
TPGLPVAHQL PMFALWNE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010936939.10.0PREDICTED: AP2-like ethylene-responsive transcription factor ANT isoform X1
TrEMBLM0S2030.0M0S203_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr1P21950_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP79738151
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72570.11e-124AP2 family protein