PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010936889.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bZIP
Protein Properties Length: 272aa    MW: 28640.2 Da    PI: 6.3096
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010936889.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_165.78.3e-21182244163
                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     e+elkr++rkq+NRe+ArrsR+RK+ae+eeL+++v + ++eN +Lk+el++++ e++kl+se+
  XP_010936889.1 182 ERELKRQKRKQSNRESARRSRLRKQAECEELANRVVTQKEENNSLKEELKRMRGECDKLTSEN 244
                     89***********************************************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF165962.2E-2633144No hitNo description
Gene3DG3DSA:1.20.5.1704.5E-18176241No hitNo description
PfamPF001702.6E-18182244IPR004827Basic-leucine zipper domain
SMARTSM003387.8E-19182246IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.151184247IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.41E-10185241No hitNo description
CDDcd147022.52E-20187238No hitNo description
PROSITE patternPS000360189204IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    Send to blast
MGGSYQYSPY PMPSTNGIAE ASVAGASGTE TDGKVNKTGK ASSGSANGVF SQSGESGSEG  60
SSEGSDANSQ NGSRLKHGSE HGSGDEEAQK GRTGQTTSNE VTQTLSTPIV LNPTVPFVTI  120
PPGGLVGPTT TLNIGMDYWG GSASVSAVRG KVPSAPSTAP FVPSRLAGSR DKVPPDPSIQ  180
DERELKRQKR KQSNRESARR SRLRKQAECE ELANRVVTQK EENNSLKEEL KRMRGECDKL  240
TSENATLAEK LGKHLGDESR SDEQVDSVNG DG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1198204RRSRLRK
2198205RRSRLRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010936889.10.0PREDICTED: transcription factor HBP-1a-like isoform X8
SwissprotQ501B23e-61BZP16_ARATH; bZIP transcription factor 16
TrEMBLA0A068UTT93e-70A0A068UTT9_COFCA; Uncharacterized protein
STRINGPOPTR_0003s09630.15e-66(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.15e-48basic region/leucine zipper transcription factor 16