PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010936888.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bZIP
Protein Properties Length: 298aa    MW: 31305.3 Da    PI: 8.6674
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010936888.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_165.49.7e-21208270163
                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     e+elkr++rkq+NRe+ArrsR+RK+ae+eeL+++v + ++eN +Lk+el++++ e++kl+se+
  XP_010936888.1 208 ERELKRQKRKQSNRESARRSRLRKQAECEELANRVVTQKEENNSLKEELKRMRGECDKLTSEN 270
                     89***********************************************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF165961.3E-3640170No hitNo description
Gene3DG3DSA:1.20.5.1701.4E-17202267No hitNo description
SMARTSM003387.8E-19208272IPR004827Basic-leucine zipper domain
PfamPF001703.0E-18208270IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.151210273IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.83E-10211267No hitNo description
CDDcd147023.05E-20213264No hitNo description
PROSITE patternPS000360215230IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    Send to blast
MGGSYQYSPY PMPSTNGIAE ASVAGASGTE TDGKLHGGKE RSPLKKSSGS LGSLNMLTGK  60
VNKTGKASSG SANGVFSQSG ESGSEGSSEG SDANSQNGSR LKHGSEHGSG DEEAQKGRTG  120
QTTSNEVTQT LSTPIVLNPT VPFVTIPPGG LVGPTTTLNI GMDYWGGSAS VSAVRGKVPS  180
APSTAPFVPS RLAGSRDKVP PDPSIQDERE LKRQKRKQSN RESARRSRLR KQAECEELAN  240
RVVTQKEENN SLKEELKRMR GECDKLTSEN ATLAEKLGKH LGDESRSDEQ VDSVNGDG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1224230RRSRLRK
2224231RRSRLRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010936888.10.0PREDICTED: transcription factor HBP-1a-like isoform X7
SwissprotQ501B21e-76BZP16_ARATH; bZIP transcription factor 16
TrEMBLA0A068UTT92e-87A0A068UTT9_COFCA; Uncharacterized protein
STRINGPOPTR_0003s09630.13e-82(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.12e-55basic region/leucine zipper transcription factor 16