PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010936569.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 354aa    MW: 39379.7 Da    PI: 4.393
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010936569.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.81.3e-184392255
             AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    ++ GVr+++ +grWvAeI+d +    ++ r++lg+f+tae+Aa+a+++a+  l+g
  XP_010936569.1 43 RFVGVRQRP-SGRWVAEIKDtV----QKIRVWLGTFDTAEDAARAYDEAACLLRG 92
                    689******.7*********55....35**********************99998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.5E-274399IPR001471AP2/ERF domain
PfamPF008471.3E-124392IPR001471AP2/ERF domain
CDDcd000183.28E-304399No hitNo description
SMARTSM003807.3E-3543106IPR001471AP2/ERF domain
PROSITE profilePS5103219.28243100IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-1943100IPR016177DNA-binding domain
PRINTSPR003678.6E-84455IPR001471AP2/ERF domain
PRINTSPR003678.6E-86682IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    Send to blast
MVRKRKSLVE VKEEGTRVAK TSSWDEAVME AAASGGGRRP RNRFVGVRQR PSGRWVAEIK  60
DTVQKIRVWL GTFDTAEDAA RAYDEAACLL RGASTRTNFW PCSPASHRLP PALPSKIYNH  120
LLMRLKASNS LAGDGAAVPL PENQQPPQQQ QEQCGDEGLD DIDDFQFTDF LNDPNVSDSI  180
LTNNTSFHDD IWKSVQSNCT KEVEQSEREL DQNMVMVGQF GTKVVGEEEE VMGDLEAMDF  240
QFVDSLEGSS CLYSPFEVVE EVTEQIEQEE SGAGDEKWMF ASPMKRMKYE RRISASLYAI  300
SGISECLNLR LGEGRGVHDS TSLGIACEED KGDEVKKVGD GLEVEVENSQ HQAN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010936569.10.0ethylene-responsive transcription factor ERN1-like
TrEMBLA0A2H3XQA90.0A0A2H3XQA9_PHODC; ethylene-responsive transcription factor ERN1-like
STRINGXP_008787214.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP54823052
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.12e-21related to AP2 11