PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010935392.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bZIP
Protein Properties Length: 257aa    MW: 27984 Da    PI: 5.0858
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010935392.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_150.25.4e-16109163256
                     XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                     ++++r +r++kNReAA rsR+RK+a+++eLee+v+ L  eN++L+ e  e k  +
  XP_010935392.1 109 AADQRKKRLIKNREAAARSRARKQAYTQELEEEVAHLLDENRKLQYEGIECKHRC 163
                     5799****************************************98766666555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.2E-11108172IPR004827Basic-leucine zipper domain
PfamPF001703.8E-13110163IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.887110155IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.56E-11113155No hitNo description
Gene3DG3DSA:1.20.5.1701.7E-14113165No hitNo description
PROSITE patternPS000360115130IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    Send to blast
MEEVWKDISL STLQQGMEAN RTTTTSFGGI IVQDLLGQAF KEPSPASAPL DDLSLPPSSS  60
NLVGYPNPNN PHTDTNGGAS PAGLFACCTK KRASEQQMEA SFGSGNGNAA DQRKKRLIKN  120
REAAARSRAR KQAYTQELEE EVAHLLDENR KLQYEGIECK HRCSHQRGSP WEQLKGISHG  180
PDHVGKVKGV EEMKDSNVGV QGEATMVVDE EDPERKSPNS ISSNTMELPS IRQQGNVVEG  240
APEVGKMELE GVDDHGY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010935392.10.0PREDICTED: protein FD-like
TrEMBLM0S4U04e-29M0S4U0_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr2P03490_0011e-28(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP97643044
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17770.22e-15basic region/leucine zipper motif 27