PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010933290.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family TCP
Protein Properties Length: 246aa    MW: 25620.6 Da    PI: 10.526
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010933290.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP126.13.8e-39341323107
             TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssgkaaksaak 96 
                     +kk +++++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++++as++  a s + s+s       ++sa+ 
  XP_010933290.1  34 VKKAPSKDRHSKVDGRGRRIRMPIVCAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFStLATSLRHSTS-------SSSAPL 121
                     79******************************************************************88865555555555.......333333 PP

             TCP  97 skksqksaasa 107
                      +k+q+++++ 
  XP_010933290.1 122 DHKPQHHPSAP 132
                     34444444433 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5136927.9923993IPR017887Transcription factor TCP subgroup
PfamPF036341.4E-3439128IPR005333Transcription factor, TCP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    Send to blast
MSGVLTGHSH QRQQMTPGNN DNGNGNGNGV PLVVKKAPSK DRHSKVDGRG RRIRMPIVCA  60
ARVFQLTREL GHKSDGQTIE WLLRQAEPSI IAATGTGTTP ASFSTLATSL RHSTSSSSAP  120
LDHKPQHHPS APFILGKRLR ADDDDDDSSA TKNGGVGMGP MGGFWAVSAR QDFGQVWSFA  180
APEMVVPPGS LSGSFAVAAQ PVGKASAARG GNYLPMVQGH LNLLASLSGS PAAASAAGRS  240
TEDEPR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010933290.11e-180transcription factor TCP7
SwissprotQ9FMX26e-77TCP7_ARATH; Transcription factor TCP7
TrEMBLA0A2H3YDJ61e-107A0A2H3YDJ6_PHODC; transcription factor TCP7
STRINGXP_008797207.11e-108(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP194133100
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23280.12e-49TCP family protein