PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010931879.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bHLH
Protein Properties Length: 442aa    MW: 48507.8 Da    PI: 5.3886
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010931879.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.63e-053393711754
                     HHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  17 NsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      ++   L++l+ +      +K + a++L +A+eYIk+L
  XP_010931879.1 339 GDRVTALQQLVSPF-----GKTDTASVLHEAIEYIKYL 371
                     55666677777776.....8*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.579322371IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.73E-5332375No hitNo description
SuperFamilySSF474593.01E-11332391IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.3E-8332392IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 442 aa     Download sequence    Send to blast
MAEEFQTGIY NSGRWWSTTR TGVFDGPVMS TSVSCSTEFN WATAADVVEA KSRSSDESLG  60
SVSNSSITFQ DTHRPPASDQ FAADPIVDST LQVSDFGLSS PSVNWNQPFL TTGGRAENNL  120
PAFLQEDMSS GSYLRHEPVI ESNQIHMNVE SSSSLNLLED LKQGLMHDQH HLISSGNSRP  180
LFPAPFGLPP TLLQCLFEPE TKHPESFNNQ RMDSLMRYHG VLNESLQSEA AKLPEFDKAL  240
PVKHQLHFSN NTPFWNPSAI ATTETSLGLY SSTTTDLAPH AFEGKTSCSN VLVQSNSEGA  300
GESRSNATKK SSNEPAFKKP RIETPSPLPT FKVRKEKLGD RVTALQQLVS PFGKTDTASV  360
LHEAIEYIKY LHEQVGVLSA PYLKNGHQVQ HLQNSDEING GEGPQLDLRS RGLCLVPISS  420
TFAVVSETPV DFWTPTFGGT YR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010931879.10.0transcription factor bHLH112
TrEMBLA0A2H3ZRD50.0A0A2H3ZRD5_PHODC; transcription factor bHLH112
STRINGXP_008810246.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP22163787
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61660.18e-56bHLH family protein