PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010931855.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family C2H2
Protein Properties Length: 476aa    MW: 51066.3 Da    PI: 9.671
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010931855.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.10.00013243265223
                     EETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                     +C+ Cg+ F  ++ L+ H  + H
  XP_010931855.1 243 TCHRCGEQFGKWEALEAHHLSrH 265
                     7*****************99877 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE patternPS000280244265IPR007087Zinc finger, C2H2
SuperFamilySSF563996.23E-24267475No hitNo description
Gene3DG3DSA:3.90.228.101.6E-9294473IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 476 aa     Download sequence    Send to blast
MNGFIGVSSV EMEGEKRYGA LSQMSKSHWR EGKGEKKKGD KMPAVWFALK KSLHCKSEPS  60
DVCEPKAKGH LSTILTRKPC RSGCSRSIAN LKDVIHGQRR HHERPASCSP RSIGSSEFLN  120
PITHEVVLSD SRCELKITGL GGGGGGPEGG AGVGSAYMGT LRPGTPGPGG GHHALNYSPS  180
SPLRGSTPPR RALGAAANRE GHNLGGSSLH DAVFGNGGGG SLFSSAPRAF HDVGSHGPSA  240
TITCHRCGEQ FGKWEALEAH HLSRHAVTEL VEGDSSRKIV EIICKASLLK PESSCGRIER  300
VLKVHNVQRT LARFEEYREM VKIKASKLPK KHPRCLADGN ELLRFYGTTV SCSLGMSGSS  360
NLCTSEKCNV CRIIRHGFST KKELKGGIGV FTTSTSGRAL ESTEVFDDNP SSRKALLVCR  420
VIAGRVHKPM DNLQDLASQS GFDSVAGKVG LYANIEELYL LNPRALLPCF VVICKH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010931855.10.0uncharacterized protein LOC105052658
TrEMBLA0A2H3XJB40.0A0A2H3XJB4_PHODC; uncharacterized protein LOC103703552
STRINGXP_008784662.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP32772841
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27240.11e-157C2H2 family protein