PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010931001.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bZIP
Protein Properties Length: 331aa    MW: 35492.4 Da    PI: 7.8397
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010931001.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.11e-09181239563
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     kr++r   NR +A rs +RK  ++ eLe+kv++L++e ++L  +l  l+     l++e+
  XP_010931001.1 181 KRAKRILANRQSAARSKERKIRYTSELERKVQTLQTEATTLSAQLTLLQRDTTGLTAEN 239
                     9********************************************99998877777665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.2E-16177241IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.944179242IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.2E-10181233No hitNo description
Gene3DG3DSA:1.20.5.1701.6E-10181235No hitNo description
PfamPF001701.7E-8181235IPR004827Basic-leucine zipper domain
CDDcd147033.30E-25182231No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0007231Biological Processosmosensory signaling pathway
GO:0008272Biological Processsulfate transport
GO:0009294Biological ProcessDNA mediated transformation
GO:0009652Biological Processthigmotropism
GO:0009970Biological Processcellular response to sulfate starvation
GO:0045596Biological Processnegative regulation of cell differentiation
GO:0051170Biological Processnuclear import
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003682Molecular Functionchromatin binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0043621Molecular Functionprotein self-association
GO:0051019Molecular Functionmitogen-activated protein kinase binding
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    Send to blast
MDPTGHPPPN PRFGSIPPNP RGAAAGHRRA YSETFLPLPD DLLFDTDPDF GISDIDFPCL  60
SDDSLSAGGG LPPVDPGRSD PPAVDQGRGG RPTPTAGTHL RSLSVDAAFF EGLAFQGAPP  120
SSGGGGGGGG VQDRRGLHRR SGSMDGATSL FERESSPASS DPAKKAVAAE KLADLALIDP  180
KRAKRILANR QSAARSKERK IRYTSELERK VQTLQTEATT LSAQLTLLQR DTTGLTAENR  240
ELKLRLQSME QQAHLRDALN EALREEVQRL KIATGQLPNI NGNRFNWGPQ QSVPPYHQSG  300
HQAQHRPSPS QSSPNGQSMS SSSLNDPMDF M
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00184DAPTransfer from AT1G43700Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010931001.10.0PREDICTED: transcription factor VIP1-like
SwissprotQ9MA752e-71VIP1_ARATH; Transcription factor VIP1
TrEMBLM0RGS31e-120M0RGS3_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr10P09470_0011e-120(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP19253892
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43700.14e-45VIRE2-interacting protein 1