PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010929446.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family Dof
Protein Properties Length: 381aa    MW: 40868.7 Da    PI: 7.2476
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010929446.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof125.32e-3990149362
          zf-Dof   3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                     ++alkcprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rknk+++
  XP_010929446.1  90 QAALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRVK 149
                     7789*****************************************************976 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074782.0E-3087147IPR003851Zinc finger, Dof-type
PfamPF027011.2E-3391147IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.52593147IPR003851Zinc finger, Dof-type
PROSITE patternPS01361095131IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    Send to blast
MLCDGEKLRI PSTNERPQVR SMSTSPQNMG EMLLIPGNNN SENNNTDTNN NKNASTATSN  60
SSTSTNSNMI HAAAAPSAAR VMDKPAQDHQ AALKCPRCDS SNTKFCYYNN YSLSQPRHFC  120
KACKRYWTRG GTLRNVPVGG GCRKNKRVKK PTSTAASDPL PSALMPPTNS VPPISLPNPA  180
SHLDSPMNPL FYSLPTASSS SGLAFSGLRA PSVPHGISIP CTGFDLPQPQ LNSLGLGFPS  240
SQSQSQRDDE FHLSQLQTSA SVMNDHPLFG STAASLLLSS LRQPKKLEDY QALMPYEELH  300
AASAEAIGNL GVIKEVKLEG DSNAIDHNRI EWPIPLENSF DAIIPAASTS LAGDSSFLYW  360
NSAIGAWPDS AHCESSVAPL I
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010929446.10.0dof zinc finger protein DOF1.4 isoform X1
RefseqXP_029123042.10.0dof zinc finger protein DOF1.4 isoform X1
TrEMBLA0A2H3X7M20.0A0A2H3X7M2_PHODC; dof zinc finger protein DOF1.4-like
STRINGXP_008779534.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP88953041
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28310.12e-36Dof family protein