PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010928452.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bZIP
Protein Properties Length: 440aa    MW: 49286.3 Da    PI: 8.7859
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010928452.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.44.8e-11151191545
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                     k  rr+++NReAAr+sR+RKka++++Le+   +L++  ++L
  XP_010928452.1 151 KTLRRLAQNREAARKSRLRKKAYVQQLENSRIKLTQLEQEL 191
                     7789************************9777776665554 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1709.6E-9147193No hitNo description
SMARTSM003384.6E-9147232IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.312149193IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.81E-7151193No hitNo description
CDDcd147082.14E-22151203No hitNo description
PfamPF001703.7E-8151191IPR004827Basic-leucine zipper domain
PROSITE patternPS000360154169IPR004827Basic-leucine zipper domain
PfamPF141444.9E-31241315IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 440 aa     Download sequence    Send to blast
MANKGSSTLR QQQEQHISFG LIQPSSSTHG NFIKSKETGA FDLGELDQAL FMYLNGQDSP  60
SAQEQRRTLN IFPSQPMHVE PSTKGGISFV SPTGSGTKKS SDQIMELGNP ISDPPALPDT  120
GKDIKAVVKK EGNRKGKSIS EQGGPRTPDP KTLRRLAQNR EAARKSRLRK KAYVQQLENS  180
RIKLTQLEQE LQRARAQGLF FGGGALLGDQ GFPPGISSLS SDAAMFDMEY AKWLEEHHRR  240
MCNLRAAVQE HLPETELRMF VDNCVAHYEE MVNLKSIVIK SDVFHLIAGM WKTPAERCFM  300
WMGDFRPSEL IKMLLSHLEP LTEQQILGVC GLQQSTQETE EALSQGLEAL NQSLSDIVAS  360
DALSCPSNMA NYMGQMVIAM SKLTSLEGFV RQADNLRQQT FHRLHQILTT RQMARCLLAI  420
AEYFHRLRAL SSLWLSRPRQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010928452.10.0PREDICTED: transcription factor TGA2-like
SwissprotP239231e-126HBP1B_WHEAT; Transcription factor HBP-1b(c38)
SwissprotO241601e-126TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLQ52MZ20.0Q52MZ2_TOBAC; TGA10 transcription factor
STRINGVIT_08s0007g06160.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP78763543
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-155bZIP family protein