PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010928416.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family C2H2
Protein Properties Length: 433aa    MW: 46918.7 Da    PI: 9.3599
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010928416.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.50.00022198220223
                     EETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                     +C++Cg+ F   + L+ H  + H
  XP_010928416.1 198 TCHKCGEQFGKLEALEAHHLSkH 220
                     7*****************99877 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE patternPS000280199220IPR007087Zinc finger, C2H2
SuperFamilySSF563991.06E-19222432No hitNo description
Gene3DG3DSA:3.90.228.103.6E-9244406IPR012317Poly(ADP-ribose) polymerase, catalytic domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 433 aa     Download sequence    Send to blast
MPTVWFTLKK SLQCKSEPSD VHDPKARVPL AILTRRPGRS GCSRSIANLK DVIHGSKRHL  60
EKPPSCSPRS IGSSEFLNPI THEVILSNSR CELRITGFGG CHEGEAGVGS TYVGTLRPGT  120
PGPGGHFGLQ HNPSVRGAST TPPRRSPSLL GDKEGYGFGG SSLSSAVFAN GGGGVHRVSF  180
TPRASHEARS HGSSANITCH KCGEQFGKLE ALEAHHLSKH AVTELVEGDS SRKIVEIICR  240
TSLVKSESSC WRIERVLKVH NMQKTLARFE EYREMVKLRA SKLPKKHPRC LADGNELLRF  300
YGTTIACSLG MNGTSSLCSS EKCNVCQIIR YGFPTKKELK GGIGIGVFTT STSGRAFESI  360
EIYEDDPNVK KALLVCRVIA GRVHKPLDNF QELAGESGFD SLAGKVGLYA SFEELYLLSP  420
RALLPCFVVI CKS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010928416.10.0uncharacterized protein LOC105050187
TrEMBLA0A2H3X1230.0A0A2H3X123_PHODC; uncharacterized protein LOC103696776
STRINGXP_008776712.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP32772841
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27240.11e-166C2H2 family protein