PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010923445.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bZIP
Protein Properties Length: 383aa    MW: 40062.8 Da    PI: 8.1964
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010923445.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_168.88.4e-22258321164
                     XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
          bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkseve 64 
                     e+elkrerrkq+NRe+ArrsR+RK++e++eL +kv+eL +eN+aL  e+e+lkk +  lk+e+e
  XP_010923445.1 258 ERELKRERRKQSNRESARRSRLRKQQECDELSRKVAELNSENSALTLEVENLKKFCRDLKAENE 321
                     89**********************************************************9986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF165962.2E-997228No hitNo description
Gene3DG3DSA:1.20.5.1702.8E-16253318No hitNo description
PfamPF001702.7E-19258321IPR004827Basic-leucine zipper domain
SMARTSM003386.7E-20258322IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.036260323IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.0E-10261317No hitNo description
CDDcd147021.83E-21263314No hitNo description
PROSITE patternPS000360265280IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 383 aa     Download sequence    Send to blast
MGSTEETSTA GAAAEKPSRK AAASTSPAPA AAPPPSSSRE SPTPTQPPLQ VAAHVFSDWA  60
ASLQAFYGSG AAATAPYPFA WGTPGMAYPT TDPSDGKNKG SSGNAGGSPG KSGDGSKMTS  120
SAAENSSRSG DSGSEGSSDT RDDDAKPKDL SSSKKRSYGN MMAEVDTPQP ITAAQYGGTV  180
VEPSYSSRGR SATKLPVSAP GRIVLTSPPT NLNIGMDLWN ASHAGAVPVK TRPTEAGIAT  240
ATGRWDGVTA EQQRIQDERE LKRERRKQSN RESARRSRLR KQQECDELSR KVAELNSENS  300
ALTLEVENLK KFCRDLKAEN ESLEAGLTHF YGAGMVSALG SKVESSAVPS VGGDGSDHVH  360
QSPVDSNRNK GKFYTGIDNP NQL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1274280RRSRLRK
2274281RRSRLRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010923445.10.0PREDICTED: DNA-binding protein EMBP-1-like isoform X2
TrEMBLM0SU759e-81M0SU75_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr4P33130_0013e-80(Musa acuminata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.15e-33basic region/leucine zipper transcription factor 16