PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010922502.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family Dof
Protein Properties Length: 294aa    MW: 31665.3 Da    PI: 8.3876
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010922502.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof128.81.5e-403798263
          zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63
                    +++alkcprCdstntkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rknk+sss
  XP_010922502.1 37 PDQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKGCRRYWTQGGSLRNVPVGGGCRKNKRSSS 98
                    6899******************************************************9875 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074783.0E-283595IPR003851Zinc finger, Dof-type
PfamPF027015.2E-343895IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.5624195IPR003851Zinc finger, Dof-type
PROSITE patternPS0136104379IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005730Cellular Componentnucleolus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    Send to blast
MEVSNARQQV MASHPLEEVL VCSKTQQPPE RKLRPHPDQA LKCPRCDSTN TKFCYYNNYS  60
LSQPRYFCKG CRRYWTQGGS LRNVPVGGGC RKNKRSSSSS SSSSSSSKRI SDQDPTSNSN  120
PLLSSLIPPP RPYDPSDLTL AFARLHKRPT TKQLGLEDLD TFLLGNPNPN PNPGTSSIPT  180
APASGFLDIL RSGFVDTTSP SGFHNLYYGF GGNGNVEGGV SGEEVMFPFE GGFGGATTAT  240
SQGSCKAMDG GENKVLMGLQ WPLSGDGNLV MDSGRDIWNG VGSSWHGLIN SSLM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010922502.10.0dof zinc finger protein DOF2.1
TrEMBLA0A2H3XHE31e-160A0A2H3XHE3_PHODC; dof zinc finger protein DOF2.1
STRINGXP_008783672.11e-160(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP47043263
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24060.13e-37Dof family protein