PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010920615.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family Dof
Protein Properties Length: 344aa    MW: 35824 Da    PI: 9.3921
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010920615.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof124.14.6e-3971131262
          zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 
                     +e alkcprCdstntkfCy+nnyslsqPr+fCk+CrryWt+GGalrnvPvGgg+r+nk+++
  XP_010920615.1  71 PEPALKCPRCDSTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRTK 131
                     67899*****************************************************975 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074782.0E-3655129IPR003851Zinc finger, Dof-type
PfamPF027011.1E-3274129IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.73975129IPR003851Zinc finger, Dof-type
PROSITE patternPS01361077113IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    Send to blast
MVFPTVPVYL DPRNWNQQAH HQPQSSSGGV SGEPLQPPTG VVAARPEGPA AGLVRPGSMV  60
DRARLAKIAQ PEPALKCPRC DSTNTKFCYF NNYSLSQPRH FCKTCRRYWT RGGALRNVPV  120
GGGCRRNKRT KPAGSSTSKS STTTTTTDRQ AGASSSTSST ATTVVGISGA IPSNLPMPPQ  180
MPFMAATLHP LAEYNTPSIG LSFAGIQPVD AMDYQVGASS SSAGGGVGLE QWRLPQIQQF  240
PFFGGLEPPP PPPAPVSGLY PFDGEGSGVD GGAFAKATGS GLITQLASVK MEDNQHGLGL  300
PRQYPGVPRN DQYWGSSSGG GSSTGSGWAP DLSGFNSSSA GNLL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1124131RRNKRTKP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010920614.10.0dof zinc finger protein DOF5.1
TrEMBLA0A2H3X7N21e-146A0A2H3X7N2_PHODC; dof zinc finger protein DOF5.1-like isoform X2
STRINGXP_008779546.11e-146(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G55370.12e-53OBF-binding protein 3