PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010914790.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family GeBP
Protein Properties Length: 391aa    MW: 43090.2 Da    PI: 5.5318
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010914790.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF5731162.1e-36112210297
          DUF573   2 lfqrlwseeDeivlLqGlidfkaktgk...spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelsk 93 
                     lfq+lw++ Dei++LqG+++f++++g+   ++++d+  fy+++k++++++++k+qlveK+rrLKkK++++v++++sgke++f+++hd+ +fe+++
  XP_010914790.1 112 LFQKLWTDADEIAILQGFLEFTSQRGTthaNYQHDTGPFYDQIKSRLQVDFNKNQLVEKLRRLKKKYRNMVNRMASGKEFVFKSPHDKATFEIAR 206
                     79************************98867777************************************************************* PP

          DUF573  94 kiWg 97 
                      iW 
  XP_010914790.1 207 EIWS 210
                     ***7 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.9E-33113210IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 391 aa     Download sequence    Send to blast
MASTAEDDER GAALYDEDED DSDDGVDSDE EYDDDAITDG QAATPPPAAA SAAQKLLHSS  60
SSISNPSASA SIPQNGGGGS IVAYPDGKRQ RILPPGEERK RLTVAHDESR RLFQKLWTDA  120
DEIAILQGFL EFTSQRGTTH ANYQHDTGPF YDQIKSRLQV DFNKNQLVEK LRRLKKKYRN  180
MVNRMASGKE FVFKSPHDKA TFEIAREIWS PSFKRTRNRD PGNAPNPQLQ ESSNLVPVEV  240
AEDVSLSSDH MMSRPRRRQF GRRSEGAPEM AVPVPTPVVS VPVLDHAPCS SAPIPNANLI  300
EQTVKSCLSP LFKELLQYAM GGPCAPVGAG DAGAPLNPLL LNIAGGSGAL QADEKWRKQQ  360
ILELEVYLKR VELVREQIKS KLEELRSMRS S
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010914790.10.0probable transcription factor At3g04930
TrEMBLA0A2H3Z4D80.0A0A2H3Z4D8_PHODC; probable transcription factor At3g04930
STRINGXP_008807916.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP97437123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28040.14e-65DNA-binding storekeeper protein-related transcriptional regulator