PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010912402.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bZIP
Protein Properties Length: 344aa    MW: 36833.9 Da    PI: 7.4764
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010912402.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.76.7e-10185243563
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     kr++r   NR +A rs +RK  ++ eLe+kv++L++e ++L  +l  l+     l++e+
  XP_010912402.1 185 KRAKRILANRQSAARSKERKIRYTSELERKVQTLQTEATTLSAQLTLLQRDTTGLTAEN 243
                     9********************************************99998877777665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.2E-16181245IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.944183246IPR004827Basic-leucine zipper domain
PfamPF001701.4E-8185239IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.3E-10185239No hitNo description
SuperFamilySSF579591.05E-10185237No hitNo description
CDDcd147037.36E-25186235No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    Send to blast
MDPTGLPPTN HRFGLIPPNP RSVGGGHRRA HSETFLHLPD DLLFDSDPDF SISDIDFPSL  60
SDDSLSAGDA VAPGGGPPPV DSRRSDPPAV EQGRAGKPAG GAHLRSLSVD AAFFEGLSFQ  120
AAPASAAPAG GGDGMQDKRG LHRRSGSMDG ATSPFEGQSA SSTSDCAKKA MVADKLAELA  180
LIDPKRAKRI LANRQSAARS KERKIRYTSE LERKVQTLQT EATTLSAQLT LLQRDTTGLT  240
AENRELKLRL QAMEQQAKLR DALNEALREE VQRLKIATGQ HPNINGNCFN GGHQRTVPPY  300
FSHSQQLPHL SGQQAQHHHQ SPSQSSSNGQ SVSGPSMSDS MDFM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010912402.10.0PREDICTED: transcription factor VIP1-like
TrEMBLM0RGS31e-130M0RGS3_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr10P09470_0011e-129(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP19253892
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43700.18e-50VIRE2-interacting protein 1