PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010911966.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bZIP
Protein Properties Length: 311aa    MW: 34000.9 Da    PI: 6.6145
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010911966.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.29.5e-10156214563
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                     k+++r   NR +A rs +R+  ++ eLe kv++L++e ++L  +l++l+     l++e+
  XP_010911966.1 156 KKAKRILANRQSAARSKERRIRYTSELEGKVQTLQTEATTLTAQLSQLQRDTTGLTAEN 214
                     899*********************************************99888777766 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.5E-16152216IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.898154217IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.5E-10156210No hitNo description
SuperFamilySSF579591.13E-10156210No hitNo description
PfamPF001701.0E-8156211IPR004827Basic-leucine zipper domain
CDDcd147032.39E-21157206No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    Send to blast
MDPNRATDPH PSDPRLGPKP RRSGHRRAHS EILLRLPDDL LFDSDPDFSL DDVDFPSLSD  60
DTGVPVPAAA SGPEPSVGAA GHHRSMSVDG AFFDGLELRS PSAGGGVLDK VAHHRRSGSF  120
DGSSMTFEGE MAGRLDFAKK AMSDGKLAEL ALIDPKKAKR ILANRQSAAR SKERRIRYTS  180
ELEGKVQTLQ TEATTLTAQL SQLQRDTTGL TAENRELKLR LQAMEKEAEL RDALNETLRQ  240
EIQRLKMVTG EISTVNGNTF NRGIQPSPYL SHPQQLPSQT GYQAQQFHGS QPSFSVQSGS  300
AQTPSDPMDF M
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010911966.10.0PREDICTED: transcription factor VIP1-like
SwissprotQ9MA751e-64VIP1_ARATH; Transcription factor VIP1
TrEMBLM0RGS31e-99M0RGS3_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr10P09470_0014e-99(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP19253892
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G43700.11e-49VIRE2-interacting protein 1