PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010910118.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family GeBP
Protein Properties Length: 443aa    MW: 47298.2 Da    PI: 4.3098
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010910118.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573107.69.3e-34158257297
          DUF573   2 lfqrlwseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifels 92 
                     lfqrlw++eDei++L+G+++f++++g+   +++ d+  fye +kk+++++++k+ql+eK+rrLKkK+++ v + ++ gk+++f+++h+q i +++
  XP_010910118.1 158 LFQRLWTDEDEITILKGFLEFTSRRGTtfASHQyDTGPFYEEIKKQLQLEFTKNQLIEKLRRLKKKYRNVVGRmRSMGKDFAFKSPHEQAIHDIA 252
                     79************************99877778**************************************97889****************** PP

          DUF573  93 kkiWg 97 
                     + iW 
  XP_010910118.1 253 RNIWS 257
                     ****6 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045048.8E-31159257IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 443 aa     Download sequence    Send to blast
MPSAEEEEER AVFEDDDDDD DDDDLVGDDT EEDEEEDYED DDAEAAPPLT VASAPPPPPA  60
PANPAAAEEN LNDSTPSTSS SSDRAAPNPK PNLCATADPQ NGAIPVLPIS AAAPAAAAAG  120
SLFTPSSSDP VPQPSADGKP VPVAVAAVGG GYDDSRRLFQ RLWTDEDEIT ILKGFLEFTS  180
RRGTTFASHQ YDTGPFYEEI KKQLQLEFTK NQLIEKLRRL KKKYRNVVGR MRSMGKDFAF  240
KSPHEQAIHD IARNIWSANV KRARDSDDDD LNTPNNASYT IEATSAADGA MNSERRMSRS  300
RRRFRRGTAE EAAAPTVGVP VENSVPATQV ASSEAAAIPG IIEETVKSCL SPLFKELIYS  360
ATGGPLGGGA ALLGLGLGGV GAALSPLPLS LGGSPASVPA SGTPVDEKWK QQHILELEVY  420
LKRIELVRDR IKSTLEELKS SGS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010910118.10.0probable transcription factor At3g04930
TrEMBLA0A3Q0HRM10.0A0A3Q0HRM1_PHODC; probable transcription factor At3g04930
STRINGXP_008778158.10.0(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP97437123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28040.11e-55DNA-binding storekeeper protein-related transcriptional regulator