PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010909999.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family Dof
Protein Properties Length: 292aa    MW: 31498.2 Da    PI: 7.0715
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010909999.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof1291.4e-403798263
          zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63
                    +++alkcprCdstntkfCyynnyslsqPryfCk+CrryWt+GG+lrnvPvGgg+rknk+sss
  XP_010909999.1 37 PDQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKGCRRYWTQGGSLRNVPVGGGSRKNKRSSS 98
                    6899******************************************************9875 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074782.0E-232886IPR003851Zinc finger, Dof-type
PfamPF027012.9E-343895IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.3764195IPR003851Zinc finger, Dof-type
PROSITE patternPS0136104379IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    Send to blast
MEVFNVHDQA TASYPLEEVL VCSKTQQPPE RKLRPHPDQA LKCPRCDSTN TKFCYYNNYS  60
LSQPRYFCKG CRRYWTQGGS LRNVPVGGGS RKNKRSSSSS SKRIADQDPT ANSNPVLPGL  120
IPPPLSFDPS DLTLAFASLH KQPTPIQSGL DDHDAFLLGN PNHNPNASSV PTAPNDGFLD  180
ILRSGFLDTT GPSGIYNLYY GFGGNGNVEV GGSGDEVMLP LEGGFGGATT TTSQGSCKFM  240
DGGENKLLMG IQWPVEGDGK MAMESGRDVW NGVGSSWHGL INSSLMKRGT GW
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010909999.10.0dof zinc finger protein DOF2.1 isoform X2
TrEMBLA0A2H3XHE31e-140A0A2H3XHE3_PHODC; dof zinc finger protein DOF2.1
STRINGXP_008802348.11e-159(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP47043263
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24060.18e-32Dof family protein