PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010909908.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 283aa    MW: 30336.7 Da    PI: 5.3065
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010909908.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.29.7e-1951101155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     ++y GVr+++ +gr++AeIrdp +   + r++lg+f+taeeAa a+++a++ l+g
  XP_010909908.1  51 TKYLGVRRRP-WGRYAAEIRDPAT---KERHWLGTFDTAEEAAVAYDRAARTLRG 101
                     699*******.**********843...4*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008476.9E-1151101IPR001471AP2/ERF domain
CDDcd000189.48E-3051110No hitNo description
PROSITE profilePS5103221.4752109IPR001471AP2/ERF domain
SuperFamilySSF541711.11E-2152109IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.4E-2952109IPR001471AP2/ERF domain
SMARTSM003801.4E-3352115IPR001471AP2/ERF domain
PRINTSPR003671.5E-85364IPR001471AP2/ERF domain
PRINTSPR003671.5E-87591IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    Send to blast
MDFSYFFSTT TSSSSSTSPI SNGLQEKKPK RKPPRQHQDN DRNGNGTGGS TKYLGVRRRP  60
WGRYAAEIRD PATKERHWLG TFDTAEEAAV AYDRAARTLR GPHARTNFAY PDLPPGSSLT  120
PFLSPDLQQH SLLLPFYMPA ATPESPYPPV TLPDHQALRG NEPMICGGVH KPEVCYSSPS  180
SSLLTLPVTP PPPPISPLVV TSSSETDAPA VECSAPGLTE EIAAAAMWCD AGEFNACGSP  240
AASGSGGMYF EEGYVHSPLF GPMPTVDDAD GFQLGSSSSS YFF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-1941108271Ethylene-responsive transcription factor ERF096
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00163DAPTransfer from AT1G28160Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010909908.10.0ethylene-responsive transcription factor LEP-like
TrEMBLA0A2H3X4N21e-134A0A2H3X4N2_PHODC; ethylene-responsive transcription factor LEP-like
STRINGXP_008778271.11e-134(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP18853397
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28160.12e-28ERF family protein