PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010909715.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family ERF
Protein Properties Length: 242aa    MW: 25295.3 Da    PI: 9.0164
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010909715.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.11.4e-203382255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +++GVr ++ +gr++AeIrdp   gk+ r++lg+f+taeeAa+a++aa+++++g
  XP_010909715.1 33 HFRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDAAAREFRG 82
                    58*******.**********8...557************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008475.6E-143382IPR001471AP2/ERF domain
SuperFamilySSF541712.03E-223391IPR016177DNA-binding domain
PROSITE profilePS5103223.9333390IPR001471AP2/ERF domain
SMARTSM003801.4E-383396IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.2E-323390IPR001471AP2/ERF domain
CDDcd000187.22E-183391No hitNo description
PRINTSPR003675.0E-113445IPR001471AP2/ERF domain
PRINTSPR003675.0E-115672IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    Send to blast
MAPREKASCA AAAGAARGVG SGGAVAGGAK EIHFRGVRKR PWGRYAAEIR DPGKKSRVWL  60
GTFDTAEEAA RAYDAAAREF RGSKAKTNFP YPDAYQSPSG GGGGGAAGSP SSQSSTVESS  120
SREAAVPPMA QPLLPSLDLD LLRRGARFPF QPFATAASAA GVAHPYFFFD TFVRSDKANQ  180
HHLTLGTPMI LADFQTPLAG GVQSDSDSSS VVDLHPHHPS SPPPKMLPFD LDLNLPPPAE  240
IA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3gcc_A2e-212990163ATERF1
2gcc_A2e-212990163ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010909715.11e-174PREDICTED: ethylene-responsive transcription factor 4-like
TrEMBLM0SRH31e-69M0SRH3_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr4P23620_0014e-69(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38463174
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.14e-25erf domain protein 9