PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010909527.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family bZIP
Protein Properties Length: 407aa    MW: 44583.8 Da    PI: 6.1955
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010909527.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.93e-10138173540
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLea 40 
                     k  rr+++NReAAr+sR+RKka++++Le    +L +
  XP_010909527.1 138 KTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLIQ 173
                     788*************************86555554 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.9E-7130180No hitNo description
SMARTSM003385.7E-7134205IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.22136180IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.13E-6138180No hitNo description
PfamPF001702.2E-7138167IPR004827Basic-leucine zipper domain
CDDcd147082.60E-24138190No hitNo description
PROSITE patternPS000360141156IPR004827Basic-leucine zipper domain
PfamPF142231.4E-10249324No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 407 aa     Download sequence    Send to blast
MYSSHLHRGD QPQAGFNLGD AVLDLTRSPI LSPKSSSNLT AVPSSPLQFG ALVHAGMASL  60
DMAASAVGAE LDMGKLAFPR GQIENWGDSG VVVTSLRTDT STDVDADEGN PAIGLSQEGA  120
IVCLDSSTAS REKTGDQKTL RRLAQNREAA RKSRLRKKAY VQQLESSRLK LIQLEQELQR  180
ARQQGIFIAG GFLGDHSYSV GGNAQTTEGL IIESSGVKVG FKKFDGKGSF TMWKVRVEDL  240
LVQMGLDSSL EMQEDEDVVG YIQRFDQMNM DLLNIGVDLE EDKCLLLVCS LSGSFDPLMT  300
MLLYGKETLV YEEIVSVLKS NEQWEWMMKR EIFLEGLAMS ERPRKGKRGE QVGRRWNIAV  360
SLEKSGTTVD VAVKQKGAYN ILQGGAKEQP RFSTVKVVIP KALKGAQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010909527.10.0PREDICTED: uncharacterized protein LOC105035615
TrEMBLM0U0L31e-93M0U0L3_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr9P15550_0014e-93(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP5070022
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.26e-24TGACG motif-binding factor 6