PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010907517.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Arecales; Arecaceae; Arecoideae; Cocoseae; Elaeidinae; Elaeis
Family Dof
Protein Properties Length: 292aa    MW: 31612.3 Da    PI: 8.2074
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010907517.1genomeOGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof128.32.2e-403596263
          zf-Dof  2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63
                    +e+alkcprCds+ntkfCyynnyslsqPryfCk+CrryWtkGG+lrnvPvGgg+rknk+sss
  XP_010907517.1 35 PEQALKCPRCDSNNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNKRSSS 96
                    6899******************************************************9875 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074784.0E-252888IPR003851Zinc finger, Dof-type
PfamPF027012.0E-333793IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.4973993IPR003851Zinc finger, Dof-type
PROSITE patternPS0136104177IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    Send to blast
MATLPLEEVL AGCPKTQQPQ QQQQQQQERK ARPPPEQALK CPRCDSNNTK FCYYNNYSLS  60
QPRYFCKGCR RYWTKGGSLR NVPVGGGCRK NKRSSSSTSK RVQDQTLTTH STPPLPTFIP  120
PPLSYDPSGL SLTFPRFHTP PTPGQLGLDD HDSFLLGNPN PNPSQIPTAT PSFLDILRGG  180
LLDTTTNSNA FHNLYHGFGG HGRMEEVEGG VSGEEVVLPF DGGLGGSTTS TTASTPTASQ  240
GSCKAVDGGE SRVFMGLQWQ VGRDGSMGMD PGREYWNGVG SSWPGLINSS LM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010907516.10.0dof zinc finger protein DOF3.2 isoform X1
TrEMBLA0A2H3XUN01e-166A0A2H3XUN0_PHODC; dof zinc finger protein DOF3.2-like isoform X1
STRINGXP_008789033.11e-167(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24060.11e-32Dof family protein